| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04051 |
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| Symbol | psbB |
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| ID | 4781127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 373317 |
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| End bp | 374840 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640083674 |
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| Product | photosystem II PsbB protein (CP47) |
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| Protein accession | YP_001014234 |
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| Protein GI | 124025118 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03039] photosystem II chlorophyll-binding protein CP47 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.644071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGC CCTGGTATCG GGTGCACACA GTCGTTATTA ACGACCCTGG CCGTCTCTTG
GCCGTGCACC TCATGCATAC TGCTTTGTTA GCCGGCTGGG CCGGCTCAAT GGCCTTATAT
GAATTGGCCA TTTTTGATCC TTCTGATCCA GTACTTAATC CAATGTGGCG CCAAGGCATG
TATGTCATGC CCTTTATGGC CCGCCTAGGA ATTACAGGAA GCTGGAACGG ATGGGATATA
ACTGGAGCAA CCGGAGTTGA CCCCGGTTTC TGGAGCTTCG AAGGTGTTGC TGCAGCACAT
ATTGTTTTCA GTGGTCTCCT TATGCTCGCT GCCGTATGGC ACTGGACATA TTGGGACCTT
GAATTGTGGG AAGATTCCCG CACTGGAGAG CCAGCTTTAG ATCTTCCAAG AATATTTGGA
ATTCATCTTT TCTTAGCCGG CCTGACATGC TTTGGCTTTG GCGCATTTCA TTGTTCATCA
GTAGGCATAT GGGTTTCTGA TCCATATGGA TTAACTGGGC ATGTAGAAAA AGTTGCTCCA
GTCTGGGGTG CAGAAGGATT TAATCCATTC AATGCTGGAG GAATTGTCGC CAATCATGTT
GGGGCAGGAC TTTTAGGAAT AATTGGTGGA ATATTCCATA TCACCAATAG ACCTGGAGAA
AGGCTCTATA GGGCTCTAAA GCTAGGAAGT CTTGAAGGCG TTCTAGCAAG TGCTTTGGCA
GCTGTTCTTT TTGTATCCTT CGTAGTTGCT GGAACAATGT GGTATGGATC AGCAACAACT
CCAGTTGAAT TATTTGGTCC TACTAGATAT CAATGGGATT CTGGTTATTT CAAAACTGAA
ATCAACCGCA GAGTTCAAGA GTCTATGAAT GATGGTGCAT CGAAAGCTGA GGCTTATGCA
TCGATTCCTG AGCAACTTGC TTTCTACGAC TATGTAGGTA ATAGTCCCGC CAAAGGAGGA
CTATTTAGAG TTGGTGCAAT GGTTAATGGA GATGGAGTTC CGAGTGGATG GCAAGGTCAC
ATCTCATTTA CTGATAGCGA TGGCAATGAC TTAGAAGTAA GAAGAATTCC AAATTTCTTT
GAGAACTTCC CTGTCATTCT TGAAGACAAG GATGGGAACG TTAAAGCTGA CATTCCTTTC
CGTCGAGCCG AAGCTAAGTA CTCCATTGAA CAAACTGGAG TCACAGCTAC TGTTTATGGT
GGTGAATTAA ATGGACAAAC ATTTACTGAT CCAGTAATAG TTAAACGTTT AGCTAGAAAA
TCTCAGCTTG GAGAGGCCTT CAAGTTTGAC AGAGATAGAT ACAAGTCAGA TGGAGTATTC
AGAAGCTCTC CAAGAGCCTG GTTCACTTAT GCTCACTTGT GTTTTGGCTT ACTATTCCTC
TTCGGGCACT GGTGGCACGC AGCTAGGACT CTCTTTGGCG ACAGATTCTC AGGTATCGAT
CCAGAGCTTG GGGATCAGGT TGAGTTTGGT CTCTTCAAAA AACTTGGAGA CGAATCTACC
CGCCGAGTTC CTGGTCGAGC CTAA
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| Protein sequence | MGLPWYRVHT VVINDPGRLL AVHLMHTALL AGWAGSMALY ELAIFDPSDP VLNPMWRQGM
YVMPFMARLG ITGSWNGWDI TGATGVDPGF WSFEGVAAAH IVFSGLLMLA AVWHWTYWDL
ELWEDSRTGE PALDLPRIFG IHLFLAGLTC FGFGAFHCSS VGIWVSDPYG LTGHVEKVAP
VWGAEGFNPF NAGGIVANHV GAGLLGIIGG IFHITNRPGE RLYRALKLGS LEGVLASALA
AVLFVSFVVA GTMWYGSATT PVELFGPTRY QWDSGYFKTE INRRVQESMN DGASKAEAYA
SIPEQLAFYD YVGNSPAKGG LFRVGAMVNG DGVPSGWQGH ISFTDSDGND LEVRRIPNFF
ENFPVILEDK DGNVKADIPF RRAEAKYSIE QTGVTATVYG GELNGQTFTD PVIVKRLARK
SQLGEAFKFD RDRYKSDGVF RSSPRAWFTY AHLCFGLLFL FGHWWHAART LFGDRFSGID
PELGDQVEFG LFKKLGDEST RRVPGRA
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