| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03911 |
|---|
| Symbol | cpeS |
|---|
| ID | 4780298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 361834 |
|---|
| End bp | 362319 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640083659 |
|---|
| Product | phycoerythrin linker protein CpeS |
|---|
| Protein accession | YP_001014220 |
|---|
| Protein GI | 124025104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.142306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0710975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGCG GACATTCTCT AGCATTTCAA GAATTTGAAG AAATAAGAAG TAAAATAAAA
ATATCACCTT CTAAACCTAA AGACGCACGA GTTATTAAAT TTTTAAAAGA TAATTTAATA
TCTACTAAAG CAGTAAACAA AGCATTCCTA ATAAGTTGGG AAGCAAAAAG TGAATGGGGT
GAAGAGAATC AAAATGGAAA CTCTTCTGGT GAAAGTATAG TCGTTCCGAT AGAAGTTTCT
AAAACAGAAG GAAAAATAGT TAGGAGCGTT GGATATACTG AAGCAATTCA AGTAGTGTCA
TTATATAAAA TTCTTGGTGA TGGAACTCTA ATTATTTATT CAGAATATAG TCATATTAGT
ACAGAGGAAA GAATATGGTT TATCTCAAAC AATGTAAGGA GTAGATCTTC TGTTACAAGA
TCACTAGATT CATTAGCAAT CCTTCAAACA TCTTATGCAT CTGAGATTCG TTCTTTAAAA
AATTAA
|
|---|
| Protein sequence | MRSGHSLAFQ EFEEIRSKIK ISPSKPKDAR VIKFLKDNLI STKAVNKAFL ISWEAKSEWG
EENQNGNSSG ESIVVPIEVS KTEGKIVRSV GYTEAIQVVS LYKILGDGTL IIYSEYSHIS
TEERIWFISN NVRSRSSVTR SLDSLAILQT SYASEIRSLK N
|
|---|
| |