Gene NATL1_03881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03881 
Symbol 
ID4780185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp358854 
End bp359717 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content33% 
IMG OID640083656 
ProductHEAT repeat-containing protein 
Protein accessionYP_001014217 
Protein GI124025101 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.87651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0403253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAATT ACTTGAACAG TGAAATATCG ACTGAAGAAG AAAGTGAAAA GGCCAAGGGG 
GATAAACAAA ACATAATGAG TAAGAAAAAA TCAAGTCAAA AAGACATCAA GCTATTAATC
AAAGGACTTA GTGATGAAAA TGGTTTGGTA AGAAGAAATT ATGCAATAGC ACTAGCCGAG
GTTGGTTCGG CAGCGTTACC TGAATTAATC AAAGCTCTTC TGAATAGTAA AAACGTAATA
CAGAGAAGAG CGGCAGCTAA GACTTTAAAG TTAGTTAACG ATCCATCAGC TTTACCTCAT
TTAATAAAAG CACTTACCAG TGATTCAGAT TCTGTAGTGC AATTTTCAGC AGCTGGTGCA
ATTGCAATTT TTGGAGAGGC TGCTGTTAAT CATCTAATCA TTGTCTTGGA GAATCAAGAA
TATACAGAAA TGCAATATGG TCTTGCAGCA TGGTGTTTAG AATTTATTGG AGCTAAAGCC
TCTAATGCAA TAAAAAAAGC AGCTAAATCA AAAAACACCA ATGTAAAATC AGCTGCAATT
TCAGCACTTG AAGAACACAT TAGACAGTCC CAAGATCAGG AAGCAATTCA AATAGTAGAA
AGGGCTATTA ATGATCCTGC TGAAAATGTT CAGATTGAAG CTATTAAATT AGTTGGTAAA
TTGTATAGGA TAGAATCATT AATTCCTACC TTAATATTAA AATTAAAACA CAAAAATCCA
GATATTCGAA AAGCTTCCAT ATTGTCATTA ATCCAACTTA ATATTAATGA AGCTATAAAT
CCACTCAGGG ACCTTCTTAA AATTGAGCAA GATAAAAATG TTACCGCAAT TATTAAATTA
GCTATAAAAA AAATAAATAA CTAA
 
Protein sequence
MDNYLNSEIS TEEESEKAKG DKQNIMSKKK SSQKDIKLLI KGLSDENGLV RRNYAIALAE 
VGSAALPELI KALLNSKNVI QRRAAAKTLK LVNDPSALPH LIKALTSDSD SVVQFSAAGA
IAIFGEAAVN HLIIVLENQE YTEMQYGLAA WCLEFIGAKA SNAIKKAAKS KNTNVKSAAI
SALEEHIRQS QDQEAIQIVE RAINDPAENV QIEAIKLVGK LYRIESLIPT LILKLKHKNP
DIRKASILSL IQLNINEAIN PLRDLLKIEQ DKNVTAIIKL AIKKINN