| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03831 |
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| Symbol | uvrD |
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| ID | 4779920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 354120 |
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| End bp | 356537 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640083651 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001014212 |
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| Protein GI | 124025096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.209332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.111635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT CAAACAGTAT ATTTCTAAAT GGATTAAACG AGGCGCAGTC ACATGCAGTT
GATCATTTTC ATGGTCCATT ATTAGTTGTA GCAGGAGCAG GAAGCGGAAA AACAAGAGCT
CTTACTCATC GTATTGCGCA TTTAATTACT GAATACAAAG TTGATCCTAG TTCTATTCTT
GCAGTTACTT TTACCAATAA AGCTGCAAGA GAGATGAAAG ATAGACTTGA ATTGCTTTTA
GCAAAAAGGT TATCAAGTCT TACCCACGGG AAGCCTTGGA CTGCCTTGCA AGTAGCAGAA
CAAAGAGAAA TTCGTAATCG TATACATCGT GAAATCAGTC GTGAATTATG GATAGGTACT
TTTCACGCTT TGTTTTCGAG ATTATTACGC TTTGACATCG ATAAATTCAA AGACCCTGAA
GGATTGACAT GGACTAAACA GTTTTCAATA TATGACGAAA CAGATGCCCA AAGTCTTATC
AAAGAAATAG TTACACAAGA TCTACAATTA GATCCAAAAA GATTTGAACC AAAAAAAGTA
CGATGGGCAA TCAGTAATGC CAAAAATCAA TGCTTACTTC CTGATGATTT ATCAAATAAT
CAAGAAGGTC AAAGAGGAAA ATTAGTTGCT GAAACTTATA GACTTTATAG AAAAGCTTTA
GCTGCTAATA ATGCATTAGA TTTTGATGAT CTTCTATTAA TACCTGTTCA ATTACTACAA
CAAAATGAAA AAATAAGGAC TTATTGGCAC AGTCGCTTCA AACATGTTTT AGTTGATGAA
TATCAAGATA CTAATTGGAC ACAATACGAA TTAATTAAAC AATTGGTTAC CAATGGTAAA
GATCCATCTT CTTTTCAAGA TTGGAATAAT CGATCAGTTT TTGTTGTTGG CGATGCAGAT
CAAAGTATTT ACAGCTTTAG AGCTGCGGAC TTTAGGATAC TAATGGGATT TCAAGAGGAC
TTTGGAAAGA AAAGCCTAGA CAATACATAT GATTCAACTC TTGTAAAACT AGAAGAAAAT
TATCGATCTA CCTCTACCAT CCTCGAAGCA GCAAATTCAC TAATCTCCAA CAATAAAGAA
AGAATAGATA AAGTTCTTAG AGCAACTAGA GGAGAAGGTG AGCCTATTAG ATTAACAAGG
TGTGACGATG AGATAGCAGA GGCAGAGGCA GTTATTCATA GGCTAAGAAT TTTAGATGCC
TCGAATCCAG AATTAAATTG GGGAGATATG GCTATTCTTT ATAGAACCAA TGCGCAATCA
AGAGCAATTG AGGACTCATT GGTCCGCTGG AGTATTCCAT ACATTGTGGT TGGAGGATTA
CGTTTTTATG ATCGAAGAGA AATTAAAGAT CTACTAGCTT ATTTAAGACT TTTAATTAAT
CCATCTGACA GTGTCAGTCT TCTGAGAGTT TTAAACGTTC CTAAAAGAGG GATTGGAAAA
ACAACAGTTC AAAGATTGAG TGATGCAGCT AGTCAATTAA AAATTCCTCT TTGGGAAGTT
GTAAATGACC CCGAAGCTGT CAGATCACTC GCAGGAAGAT CAGCCAAAGG TCTTTTAATT
TTTAGTGAGC TTATTAATGA ATTACAAAGT CATCTTCTCT CTTCAAGCCC CGCCGAGTTG
GTTCAATTAG TTTTAGAAAA AAGTGGCTAT TTAAGTGAAT TAATTGCAAC AGGAACAGAT
GAGGCAGAAG AAAGAAGACG CAATCTTCAA GAATTAGTTA ATGCCGCGTT GCAATATCAG
GAAGAAAGCG AAGATGCAAA TTTAGAAGGT TTTTTATCAA CTGCTGCTCT ATCAAGCGAT
GCAGATAATA AAGACACTGC GTCAAATCGA GTCACATTAA TGACTCTTCA CAGCAGTAAA
GGTTTGGAAT TTCCTGTCGT TTGTCTTGTG GGAATGGAGC AAGGCTTATT CCCAAGCTAT
AGATCACTTG ATGATCCATC TTCACTTGAG GAAGAAAGGC GACTTTGTTA CGTAGGACTT
ACTAGAGCAA AAGAAAAACT ATTTCTCTTT CATGCATCTG AGAGAAGAAT GTGGGGAGGG
ATGAGAGAAC CAGCTATCGC ATCTATATTC CTCTCCGAAA TACCAGAAGA ACTTGTTAAA
GGCGATATCC CATTATCTGG TGGGGCTACA TTAAGAAGAG AAAAAAATCT AGACAGACTA
ACTAGAATTG ATCGCCAAAG TAATAAAAAG TCCTTTCCTC GTGAAGCTGA AAATGCAGTA
AGAAAAACAT ATTCTGGTCC TTCCCCAGGG AAGCGATGGT CAGTTAACGA TAGAGTTGAA
CATTCTTCAT TTGGAGAAGG GATAATCACA CATGTTTTTG GTTCAGGAGA AAAAATCTCA
CTGGCCATAA AATTCTCAGG AATGGGGCCA AAAATATTAG ACCCAAGACT AGCTCCATTG
AAATTGATAG ATGAGTAA
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| Protein sequence | MKQSNSIFLN GLNEAQSHAV DHFHGPLLVV AGAGSGKTRA LTHRIAHLIT EYKVDPSSIL
AVTFTNKAAR EMKDRLELLL AKRLSSLTHG KPWTALQVAE QREIRNRIHR EISRELWIGT
FHALFSRLLR FDIDKFKDPE GLTWTKQFSI YDETDAQSLI KEIVTQDLQL DPKRFEPKKV
RWAISNAKNQ CLLPDDLSNN QEGQRGKLVA ETYRLYRKAL AANNALDFDD LLLIPVQLLQ
QNEKIRTYWH SRFKHVLVDE YQDTNWTQYE LIKQLVTNGK DPSSFQDWNN RSVFVVGDAD
QSIYSFRAAD FRILMGFQED FGKKSLDNTY DSTLVKLEEN YRSTSTILEA ANSLISNNKE
RIDKVLRATR GEGEPIRLTR CDDEIAEAEA VIHRLRILDA SNPELNWGDM AILYRTNAQS
RAIEDSLVRW SIPYIVVGGL RFYDRREIKD LLAYLRLLIN PSDSVSLLRV LNVPKRGIGK
TTVQRLSDAA SQLKIPLWEV VNDPEAVRSL AGRSAKGLLI FSELINELQS HLLSSSPAEL
VQLVLEKSGY LSELIATGTD EAEERRRNLQ ELVNAALQYQ EESEDANLEG FLSTAALSSD
ADNKDTASNR VTLMTLHSSK GLEFPVVCLV GMEQGLFPSY RSLDDPSSLE EERRLCYVGL
TRAKEKLFLF HASERRMWGG MREPAIASIF LSEIPEELVK GDIPLSGGAT LRREKNLDRL
TRIDRQSNKK SFPREAENAV RKTYSGPSPG KRWSVNDRVE HSSFGEGIIT HVFGSGEKIS
LAIKFSGMGP KILDPRLAPL KLIDE
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