Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_03731 |
Symbol | ndhK |
ID | 4779522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 346294 |
End bp | 347043 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640083641 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001014202 |
Protein GI | 124025086 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.23212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTGA ATCCCTTGAA AAAATCTCCC TCTTCTGAAG CTGTAAGAAA TCTTAGAGAA GCTTCCTGCG GTCCAGTTGG AACGCCGACA GTAACGAATG ATTTAAGCGA AAACATAATC CTCACTAGCC TTGAAGATCT TCACAACTGG GCAAGATTAA GTAGTCTTTG GCCTCTTCTT TATGGAACTG CTTGTTGTTT TATTGAATTT GCAGCTCTAA TTGGATCGAG ATTTGATTTT GACAGATTTG GATTAGTACC TAGAAGTTCT CCTAGACAAG CAGATCTATT AATTGTGGCA GGCACTGTCA CAATGAAAAT GGCACCTGCT CTTGTAAGGC TTTATGAGCA AATGCCAGAT CCCAAGTACG TAATTGCTAT GGGAGCTTGC ACCATTACCG GTGGAATGTT CAGCGCAGAC TCCACCACGG CAGTCAGGGG AGTTGATAAA TTAATACCTG TTGATCTTTA CCTTCCTGGA TGTCCACCAA GACCTGAAGC AATATTTGAT GCTGTCATTA AATTAAGAAA AAAAGTTGCA AACGAATCAA TCTCAGAAAG ATCAAAAATT ACCCAAACTC ATCGTTATTT AACTATCCCT CATAAAATGA AGCGAGTCGA GGCAAAAGTA AATGGACAAT ACCTAAAGGC AAAAACTCAA TTAATTGCTT TGAATCCTTC ACTATCTGAA GAGTTTGATC AATCTTTAAA AGAGGTTCAA AAAATATCTG AAGAACTTTC AAGTAATTAA
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Protein sequence | MELNPLKKSP SSEAVRNLRE ASCGPVGTPT VTNDLSENII LTSLEDLHNW ARLSSLWPLL YGTACCFIEF AALIGSRFDF DRFGLVPRSS PRQADLLIVA GTVTMKMAPA LVRLYEQMPD PKYVIAMGAC TITGGMFSAD STTAVRGVDK LIPVDLYLPG CPPRPEAIFD AVIKLRKKVA NESISERSKI TQTHRYLTIP HKMKRVEAKV NGQYLKAKTQ LIALNPSLSE EFDQSLKEVQ KISEELSSN
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