Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_03711 |
Symbol | |
ID | 4779465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 344357 |
End bp | 345754 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640083639 |
Product | hypothetical protein |
Protein accession | YP_001014200 |
Protein GI | 124025084 |
COG category | [S] Function unknown |
COG ID | [COG0391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.291486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACAAAA GAAGAAAAAG AAAATCAAGA AGAGCCACCT TGCGTAAAAG CCTTCTCGCT AGCTTGTCTT TTCATGTTTA CTCTCGCTTC AAAAGAGCTA TTAGATGGCT GTTGCCTGGA TTAGTAGTCA AAAGGTGGAT GATGACATCT GGATTGGGCT TGTTAATTGC TTTGATTGGA GCCTCTATTT GGGCTGACTT GCGTCCAATT TATTGGGTAG TTGAAATACT TTTTTGGTTT TTAGGATTCA TAACTACTTT TTTACCTAGA ACTATTTCTG GACCTTTAGT CTTTTTTATA GGGATATCTC TTTTGATTTG GGGTCAAGGG AGAAGTTTTG AATCTATTAG GCAGGCTTTA GGTTCAAAAA AAGATACTTT TTTGGTTGAT GCTTTAAGAG CTAAGCAAAA ATTAAATAGA GGTCCAAACA TCGTTGCTAT TGGAGGAGGA ACAGGTTTAT CTTCATTATT AAAAGGCTTA AAAAGATATA GCAGCCGAAT TACGGCAATA GTTACTGTTG CTGATGATGG AGGAAGTAGT GGAGTTCTTA GGAGAGAACT GGGTGTTCAG CCTCCAGGAG ACATAAGGAA TTGTTTAGCA GCTTTAGCAA CAGAAGAACC GCTTATTAAA GGACTTTTTC AATATCGCTT TCCCTCAGGT AGTGGACTTG AGGGACATAG TTTTGGGAAT CTTTTCCTAT CTGCCTTGAC TGCGATAACT GGAAGCTTAG AGACCGCAAT TACTGCTTCA AGTCGTGTTC TTGCAGTTCA GGGTCAAGTT GTACCAGCAA CTAATGTAGA TGTTCGTTTG TGGGCGGAAC TCGAAAATGG GGACCGAATA GATGGAGAGT CAGCCATAGG GAAAGCCCCC TTGCCAATAA TCAGAATCGG CTGTTACCCA TCGCGACCCC CAGCTTTGCC AAGAGCTCTA GAAGCCATAA GAAATGCTGA AATTATTTTG ATAGGTCCAG GAAGTTTATA TACTTCAATT CTTCCAAACC TGCTTGTCCC TGAAATAGTC GAGGCGATTG AGAAGAGCAA AGCTCCTAAA CTATATGTAT GTAATTTGAT GACTCAACCT GGAGAAACTG ATGGACTTGA CGTAACTGGT CATGTAAGGG CCATAGAAGC ACAATTGGCA TCAAGAGGAA TTTCTAGGAA AATATTTAGT TCAATACTTG CTCAAGATGA ATTAAAACCA TCCCCATTGG TTGATTACTA CAAATCAAAA GGGGCTGAAC CAGTCAAATG CAACAAGATT GATCTTTTAT CTAGAGGATA TAATGTTTAT TTAGCTTCTC TTCAGGGTTC AAAGGTCACT CCAACTTTGA GGCACGACCC AAGAAGTCTC GCTTTAGCAA TAATGAGGTT TTACAGAAGA TACAAAAAAG GTAAATAA
|
Protein sequence | MNKRRKRKSR RATLRKSLLA SLSFHVYSRF KRAIRWLLPG LVVKRWMMTS GLGLLIALIG ASIWADLRPI YWVVEILFWF LGFITTFLPR TISGPLVFFI GISLLIWGQG RSFESIRQAL GSKKDTFLVD ALRAKQKLNR GPNIVAIGGG TGLSSLLKGL KRYSSRITAI VTVADDGGSS GVLRRELGVQ PPGDIRNCLA ALATEEPLIK GLFQYRFPSG SGLEGHSFGN LFLSALTAIT GSLETAITAS SRVLAVQGQV VPATNVDVRL WAELENGDRI DGESAIGKAP LPIIRIGCYP SRPPALPRAL EAIRNAEIIL IGPGSLYTSI LPNLLVPEIV EAIEKSKAPK LYVCNLMTQP GETDGLDVTG HVRAIEAQLA SRGISRKIFS SILAQDELKP SPLVDYYKSK GAEPVKCNKI DLLSRGYNVY LASLQGSKVT PTLRHDPRSL ALAIMRFYRR YKKGK
|
| |