| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03641 |
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| Symbol | degT |
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| ID | 4779838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 336524 |
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| End bp | 337693 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640083632 |
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| Product | putative pleiotropic regulatory protein |
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| Protein accession | YP_001014193 |
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| Protein GI | 124025077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0562447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAC CTCCTTTTAG TCTTGAAGCT CAAATTTCTG AAATTGGAGA CGAGATTGAA
GAAGCTTTAA TTAAGGTTTT CAGAAGCGGA AAATATATTG GAGGAGAGGA AGTAGCTTCG
TTCGAAAAAG CTTTTGCCTT AGCAATAGAA ACTTCTTACT CAGTTAGTTG TAATAGTGGA
ACAGATGCAT TAATTCTTGC TTTAAGAGCA CTAAATATTG GACAAGGTGA TGAGGTGATC
ACCTCATCAT TTAGTTTTTT TGCTACTGCA GAAGCAATCA CAAGTGTTGG AGCTAGGCCA
GTTTTTGTAG ATATTGATTC TAAAAACTAT CTTATGGATC TGGATTTAAT AGAAAAAGCA
ATAACTCCCA GAACAAAAGC TATTTTGCCT GTGCATTTGT TTGGTCATCC ACTAGATATG
GATAAAATAA TTGCAATTGC TGAATCCAAT AATCTTAAGG TTGTAGAAGA TTGTGCTCAA
GCAGCTGGGG CGTATTGGGG AGGTAAACCT GTTGGAAGTT ATGGGGATAT AGGTTGTTTT
AGTTTTTTCC CTACTAAAAA CTTAGGTGCA GCAGGAGATG GAGGAGCTAT AACTACTAAT
GATTTTGATC TAGCAAAAAC AATTAGGGAA CTAGCTATTC ATGGGATGCC AAAGAGATAT
TTTCATACAA GTATTGGATA TAACAGTCGA CTTGATTCAT TACAAGCTGC AATATTAAAT
GTTAAGTTAA TCCGATTAAA TAAATGGATT GAGCAAAGAA AAGAAATAGC TATTAATTAC
ATAAATCAGT TATCATCTAT AGATTCAATT GAATTACCAT CTAATACTTT TGTTAATAAT
TCTGGTCATT CTTGGAATCA ATTTGTAATC AGAATAATGG ACAATTCTTT TATTAAAAAT
ATAAAATCTA ACTCAGATGA TGTTTTTGAT AATCTAAATA GAGATCTATT TAAAACTGAA
CTTCATAGGC TTGGTGTAAA TACAATAATT TATTACCCAA TACCCATACA TCTTCAACCA
GCATATAAAA ATTTAGAGTA TAAAGAAGGA TCTCTTCCTG TTACTGAAAA AGTATGTAGT
CAGGTTATTA GTTTACCTAT TTTCCCAGAA TTAAAATCTA TTCAGCAATC ATATGTCATT
GATAAAATAA AAGAACTATT TAAAAAATAA
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| Protein sequence | MQIPPFSLEA QISEIGDEIE EALIKVFRSG KYIGGEEVAS FEKAFALAIE TSYSVSCNSG
TDALILALRA LNIGQGDEVI TSSFSFFATA EAITSVGARP VFVDIDSKNY LMDLDLIEKA
ITPRTKAILP VHLFGHPLDM DKIIAIAESN NLKVVEDCAQ AAGAYWGGKP VGSYGDIGCF
SFFPTKNLGA AGDGGAITTN DFDLAKTIRE LAIHGMPKRY FHTSIGYNSR LDSLQAAILN
VKLIRLNKWI EQRKEIAINY INQLSSIDSI ELPSNTFVNN SGHSWNQFVI RIMDNSFIKN
IKSNSDDVFD NLNRDLFKTE LHRLGVNTII YYPIPIHLQP AYKNLEYKEG SLPVTEKVCS
QVISLPIFPE LKSIQQSYVI DKIKELFKK
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