Gene NATL1_03561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03561 
Symbol 
ID4779579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp328281 
End bp329129 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content31% 
IMG OID640083624 
ProductGcvT-like aminomethyltransferase 
Protein accessionYP_001014185 
Protein GI124025069 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAT CCCAAGCATT GATTTGGGAT GAAACATTCC CTTCATTACT TCTCAAAGGT 
CAGGGGACTA CTTCTTTTTT ACATGGTCAA ACAACCGCTG ACGTTTTTGC TCAGAAAGAA
CTAGATAGAA TATTCATGTG TTGTTGGCTA TCAACTAAAG GATTTTTAAA AGCTCTATTG
GAAATTCGAC TTTCAGATGA TATGGCTGAA ATAGTTATAA TTTGCGGTGA AATTAATTCT
ATAAGAGATG GATTTGAATC AGTGATATTT CCAGCCGACA AAGTTAAGTT AGAAGTTATA
GATCCAATTA GAAGAAGACA AGAAATAAAT AATAATAATT CATGGAAGGA GTCAGATTTT
AGTTGGATTG ATAAAAATAA TTTCAGCATA GATGGAATAA CTAAATACAA AAAAGCTACT
AAAGAAGAAT TGGAAGGTTG GAAAATAAGA CAAGGAATAC CTAGCTTTGA TAAAGAGATG
AATGGAGAAA CTAATCCTTA TGAGCTAGGC TTAGCAGATA CTATAAATCT AGATAAAGGC
TGTTATCTAG GTCAAGAGGC AATGGCGAAG TTTTTTAGAT CTAAATCTCT AAAATATCAA
CTTCGTTATT GGGAAGCTTA TGGGGCAAAT GATAATTTTC AAATTGGTAA AAAGTTTTTT
AATACTAATA AAAATGAAGG GTATAAAAAA AATGTAGGAG TTGTGACTTC TTCAATTAGG
GTTGATGATA ATTTTTTTAA TGGACTGGCT TTGATTAAGA AAACTTTTCT TGATCATGAT
TTTTGTTTTT CTGAAAATGG TGACTCTATA ACTATTAAAA AACCAATCTC TTTTACTAAT
CCTTTTTAA
 
Protein sequence
MTESQALIWD ETFPSLLLKG QGTTSFLHGQ TTADVFAQKE LDRIFMCCWL STKGFLKALL 
EIRLSDDMAE IVIICGEINS IRDGFESVIF PADKVKLEVI DPIRRRQEIN NNNSWKESDF
SWIDKNNFSI DGITKYKKAT KEELEGWKIR QGIPSFDKEM NGETNPYELG LADTINLDKG
CYLGQEAMAK FFRSKSLKYQ LRYWEAYGAN DNFQIGKKFF NTNKNEGYKK NVGVVTSSIR
VDDNFFNGLA LIKKTFLDHD FCFSENGDSI TIKKPISFTN PF