| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03411 |
|---|
| Symbol | amtB |
|---|
| ID | 4780376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 315399 |
|---|
| End bp | 316889 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640083608 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_001014170 |
|---|
| Protein GI | 124025054 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG CTTTGCAATC GCCTCCAAGG CGAACTACTT CTCGTCTCCA AGATGCAAGT
CTCTTGAACG GGCCAATGCT TCTTCTCAGA AGTATTAAAG GCTTTAGAAG GAGTCAGTCT
TGGGCATGGC TAGCCTCTAT CCCATTGGCC CTTTTGGGAT TAGGTGTTTT CACTTTCTCT
GCAAGAGCTG AGGTTGCTCT TTCAGATTTA ACAGGACCAC AAGCCGCTTC TTTCTTGGCT
GACAACCTTT GGTTATTTAT AGCCACAATC CTCGTTATTT TTATGAACGC GGGATTCGCA
ATGGTTGAAG CTGGTATGTG CCGTCAAAAA AATGCGGTCA ACATTCTAGC TAAAAATTTA
TTTGTTTTTG CTCTTGCTGT TACTGCCTAC TGGGTAATTG GTTATTCATT AATGTATGGC
GGTTCAGTTA TTGATGGATG GCTTTATTTC CAAGGCTTAT TCGTTGATCC TGACCCTTCA
GGTGCACTTG AGTGTGCAGC CGCAGGAGAT ACAGGTTGTC TTGTCCCAGC AGTTGATTTC
CTTTTCCAAT CTGCTTTTGC CGGCACTGCT GCAACGATCG TTTCGGGATT GGTTGCTGAG
AGAGTCAAAT TCGGTGAATT TGTAGTTTTC TCTATAGTTT TGACTGCTTT TATCTATCCA
ATTGCTGGAA GTTGGCAATG GAACGGTGGT TGGCTTGCTG AACTTGGTTT TATTGATTTC
GCTGGTTCAT CCATTGTCCA CTCTGTTGGA GGATGGGCAG GTCTTGTTGG AGCAATGCTT
CTTGGACCTC GTATTGGCAA ATTTGTTGAT GGCAAAGCTC AAGCGATGCC TGGACACAAT
ATGGCCATTG CAACTTTAGG AGCACTAATC CTTTGGATTG GTTGGTATGG ATTCAACCCT
GGCTCAGAAT TAGCTATGGA TCAATATGTT GCTTACGTTG CAGTTACAAC AACTTTGGCA
GCAGCTGGTG GTGCAATCGC CGCTACAGTT CTATCTACCA TTACTTCTGG TAAGCCTGAT
CTAACCATGA TCATTAATGG CATTCTTGCT GGATTAGTAA GTATCACTGC TGGTTGTGGC
AATATGACTT TTGCTGGATC TTGGCTTGCT GGTGCTGTAG GTGGATTAAT CGTCGTAGTT
GCAGTAGCTG CTCTGGATTC TGCAGGAATT GATGATCCAG TTGGTGCTTT CTCAGTTCAC
GGTGTTTGTG GAGTTTGGGG AACTGTTGTT ATCGGCCTTT GGGGCGTTGA TGGCATGGAT
CCTGGAGCTG CAGGAATTGG TCTTCTCAAT GGAGGAGGAA TTAACCAATT CTTCATTCAA
GCATTAGGTG CAGCTGCTTA TGGCATATGG ACTGTTGTGA CATGCTGGAT TGCTTGGCAA
ATTATTGGTG GCTTCTTCGG AGGTATCAGA GTTAGCGAAG CAGAAGAGAC ACAGGGACTT
GATATTGGCG AGCATGGAAT GGAGGCTTAT CCTGACTTTG CTTCTAGCTA G
|
|---|
| Protein sequence | MTTALQSPPR RTTSRLQDAS LLNGPMLLLR SIKGFRRSQS WAWLASIPLA LLGLGVFTFS
ARAEVALSDL TGPQAASFLA DNLWLFIATI LVIFMNAGFA MVEAGMCRQK NAVNILAKNL
FVFALAVTAY WVIGYSLMYG GSVIDGWLYF QGLFVDPDPS GALECAAAGD TGCLVPAVDF
LFQSAFAGTA ATIVSGLVAE RVKFGEFVVF SIVLTAFIYP IAGSWQWNGG WLAELGFIDF
AGSSIVHSVG GWAGLVGAML LGPRIGKFVD GKAQAMPGHN MAIATLGALI LWIGWYGFNP
GSELAMDQYV AYVAVTTTLA AAGGAIAATV LSTITSGKPD LTMIINGILA GLVSITAGCG
NMTFAGSWLA GAVGGLIVVV AVAALDSAGI DDPVGAFSVH GVCGVWGTVV IGLWGVDGMD
PGAAGIGLLN GGGINQFFIQ ALGAAAYGIW TVVTCWIAWQ IIGGFFGGIR VSEAEETQGL
DIGEHGMEAY PDFASS
|
|---|
| |