Gene NATL1_03081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03081 
SymbolpsbO 
ID4780290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp286857 
End bp287660 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content41% 
IMG OID640083573 
Productphotosystem II manganese-stabilizing protein 
Protein accessionYP_001014137 
Protein GI124025021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.994229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTC GTCCTCTGCT GGCTTTGATG CTGGCTTTTT GTCTCACCTT TACAACTCTC 
CCATCAAGCG CATCTGCAGC TTTAAAAGGG CGCGAGCAAG GTAACGCTCG TTTTGGCAAT
GTTGTTAATA CTGGCCAAGC TGATGCTTGC ACTGTTTTAC CAGCGGGTTC ATCGGGTTCT
ATTAATGCTG ATGGTCAATT TAAAAGCTTA TGCCTTCAGC CAACAGAAGT TTCAGTAAAA
CTTCCAGGTA ACAAGCGAAA TAAATCTGAT TTTGCAATTG CAAAAATCAT CAGTCCTCGC
TTCAATACAA GTCTTGATGA AGTTTATGGA GATCTTTCCG GAGGAAAATT CACTGAAAAA
GGTGGTATTG ACTTCTCTCT AATTACAGTT CTAGCTCCAA ATGGAGAGGA ATTTCCTTTT
GCATTCTCTG TTAAAGAGAT GGTTGCTGAA TCCAAAAAAG GAAAATCAAT AGAGCCAGGA
GCTGAATTTT CAGGTCCAAC AACAACTCCA AGCTATAGAT CTGCAGACTT TCTTGATCCA
AAAAGTCGCG CTAAATCAAC CGGTGTTGAA TATGCTCAAG CTCTCATTGC TCGTGGTGGT
GATGATGAGG ATCTTGCCAG AGAAAATGTT AAAGATGATC TTGGCGGTAA AGGTGAAATA
ACACTTACTG TCGATAGTGT TGATGCAGAC ACTAATGAGT TTGGTGGCCA ATTTGTTGCT
ATCCAACCTT CAGACAATGA CCTTGGATCA AAAGATCCTG TTGATATCAA AATCAAAGGT
ATCTTCTATG GTCGCAAAGC CTAA
 
Protein sequence
MRFRPLLALM LAFCLTFTTL PSSASAALKG REQGNARFGN VVNTGQADAC TVLPAGSSGS 
INADGQFKSL CLQPTEVSVK LPGNKRNKSD FAIAKIISPR FNTSLDEVYG DLSGGKFTEK
GGIDFSLITV LAPNGEEFPF AFSVKEMVAE SKKGKSIEPG AEFSGPTTTP SYRSADFLDP
KSRAKSTGVE YAQALIARGG DDEDLARENV KDDLGGKGEI TLTVDSVDAD TNEFGGQFVA
IQPSDNDLGS KDPVDIKIKG IFYGRKA