| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02791 |
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| Symbol | rplA |
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| ID | 4779143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 258078 |
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| End bp | 258785 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640083544 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001014108 |
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| Protein GI | 124024992 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.475982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATT TTTCTAAAAG GATGACAACG TTACTTTCCA AAGTGGAAGA GCGTTCATAT
TCTCCAATTG AAGCTATAAA GCTAGTCAAG GAGAATGCCA ATGCAAAATT CGATGAGACT
ATTGAAGCTC ATATAAGACT CGGTATTGAC CCAAAATATA CTGATCAGCA ACTAAGGACA
ACAGTTGCCT TGCCAAGTGG GACCGGTCAG AAAATACGAA TAGCGGTTGT AACACGCGGC
GAAAAAGTGA ATGAAGCAAC TAAAGCAGGC GCTGATCTGG CTGGAGAGGA AGATTTAGTT
GATTCAATCA ACAAAGGAGA AATGAACTTT GACCTTCTAA TTTCAACTCC AGATATGATG
CCTAAGGTAG CCAAACTTGG TAGAGTGCTT GGTCCTAGAG GGCTTATGCC TAATCCAAAA
GCAGGAACAG TTACGACCGA TTTAGAAGGA GCTATTAAAG AATTTAAAGC AGGAAAACTT
GAATTCAGAG CAGACAAAGC AGGAATTGTT CACGTTCGAT TTGGTAAAGC AAGTTTTTCA
GAAGAGGCAC TCCTTGAAAA TCTGAAGACG CTGCAAACAA CAATAGAAAA AAATAAACCA
AGCGGTGCAA AAGGTAAATT TTGGAGAAGC TTCTTTATCA CATCTACAAT GGGACCATCA
GTAGAAGTAG ATATAAACGA ATTACAAGAC TTGCAGAAAG AAAAGTGA
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| Protein sequence | MKNFSKRMTT LLSKVEERSY SPIEAIKLVK ENANAKFDET IEAHIRLGID PKYTDQQLRT
TVALPSGTGQ KIRIAVVTRG EKVNEATKAG ADLAGEEDLV DSINKGEMNF DLLISTPDMM
PKVAKLGRVL GPRGLMPNPK AGTVTTDLEG AIKEFKAGKL EFRADKAGIV HVRFGKASFS
EEALLENLKT LQTTIEKNKP SGAKGKFWRS FFITSTMGPS VEVDINELQD LQKEK
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