| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02681 |
|---|
| Symbol | |
|---|
| ID | 4779472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 247047 |
|---|
| End bp | 248651 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640083533 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001014097 |
|---|
| Protein GI | 124024981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATT GCTCAAAAGA AGTTTTAAAG ATAAATAAAC TTAATGCTAT TTATCCAAAT
AGTACTACTT ACGTAATAAA TGGATTAAAT CTGAAGATGA ATCGTGGGGA TAGGCTTGCA
TTGGTTGGTA GTTCAGGTTG TGGCAAAAGT ACTGTTGCTA AGGCCATAAT GCAGCTTCTT
CCAGACGGAA GTACTTGTTA TGGTGAGATT TTTTTAAATG GAAAAAATGT ATTAAAATTA
GACGAGGATT CTTTGCCAAC TATTCGAGGA AAAGAGGTTG GATTGATATT TCAGGATCCA
ATGTCACGGT TGAATCCATT AATGACTGTT GGTGATCATA TAGTTGATAC TTTTAAAGCT
CATGATAATT CTGAACCAAT TTATAACTTA GTAAAAAAAG CTAAAAGCTT ATTAGAAAAA
GTTGGAATAG ATCCTTTAAG GTTTAATTCT TTTCCACATG AATTTAGTGG CGGAATGCGA
CAACGCGTAG CTATTGCTTT GGCAATTTGT TTAAGACCTC CTTTGATAAT TGCTGATGAA
CCTACTACTA GCTTAGATAC AATAGTTGCT GATCAAATTA TGAGTGAATT GAGTTTACTT
TGTGATGAGA TTGGGACTGC TTTACTATTA ATTAGTCATG ATTTATCTAT GGCATATAAA
TGGTGTAATA AAATTGCGAT ACTTGATTGT GGGAAAATAG TAGAATCTGG AAATATTAAA
CAGATAATTG GTGATCCTAA AACTAATATT GCTCAAAAAT TAGTGGAGTC AGGAAGGTTA
TTAGAGGGTT CTGAGAGAAA GTTAATTAAT AAAAGTACTG TACTATTGAG CGTAAATAGA
TTACGTTGCT GGCATGATTT AGGCTTCTGG CCCTTCAATT CTTTTTGGTT GAAAGCTGTT
AATGAAGTTA CCTTTTCTCT GTATGAAGGT GAAACTCTTG GTATCGTAGG CCCATCAGGA
TGTGGAAAGA GTACTCTCTG TAGAGCGTTG ACTGGTTTAT TACCTACAAG AGGTGGAAGT
GTTCTTTTTC TTGGAAAGAA TATTTCAATT ATCAATAGGA AATCTTTAAA ACAATTACGT
AAATATATTC AAATTATTTT TCAAGATCCT TCTGCTTCTT TGAACCCTAA GATGTCAGTA
CTGGATGCAA TTATAGATCC AATTCTTATT CATAAATTGT TAAGTCGATC TCAAGCCAGA
GAAAAAGCTC GTAATCTTTT AGACCTAGTT GGTTTAGTGC CCACAGCAAT GTATGAACAA
CGCTTACCTT CTCAACTTTC AGGAGGACAA CAGCAAAGAG TAGCTATTGC AAGAGCACTT
GCACTTAGTC CCAAAATACT TATCTGTGAT GAAAGTGTCA GTATGTTAGA TGCAGAAATT
CAAGCAGAAG TCTTAGAGTT GCTACGCTCT TTGCAAGAAA AATTGAAACT GTCTATGTTG
TTCATAACTC ATGATTTATC TGTTGCAGCA GGCTTTTGTC ACAGAGTATT AGTGTTAGAT
AAAGGGAAAA TTATCGAAGA AAATTTTGGT AAAAATTTGT TAAATGATCC TCAAAAATAC
TTAACAAAAA AGATGGTTAA GGCATGTCCT AGACTTCCGA ATTAA
|
|---|
| Protein sequence | MNNCSKEVLK INKLNAIYPN STTYVINGLN LKMNRGDRLA LVGSSGCGKS TVAKAIMQLL
PDGSTCYGEI FLNGKNVLKL DEDSLPTIRG KEVGLIFQDP MSRLNPLMTV GDHIVDTFKA
HDNSEPIYNL VKKAKSLLEK VGIDPLRFNS FPHEFSGGMR QRVAIALAIC LRPPLIIADE
PTTSLDTIVA DQIMSELSLL CDEIGTALLL ISHDLSMAYK WCNKIAILDC GKIVESGNIK
QIIGDPKTNI AQKLVESGRL LEGSERKLIN KSTVLLSVNR LRCWHDLGFW PFNSFWLKAV
NEVTFSLYEG ETLGIVGPSG CGKSTLCRAL TGLLPTRGGS VLFLGKNISI INRKSLKQLR
KYIQIIFQDP SASLNPKMSV LDAIIDPILI HKLLSRSQAR EKARNLLDLV GLVPTAMYEQ
RLPSQLSGGQ QQRVAIARAL ALSPKILICD ESVSMLDAEI QAEVLELLRS LQEKLKLSML
FITHDLSVAA GFCHRVLVLD KGKIIEENFG KNLLNDPQKY LTKKMVKACP RLPN
|
|---|
| |