| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02641 |
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| Symbol | trmE |
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| ID | 4779880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 242683 |
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| End bp | 244077 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640083529 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001014093 |
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| Protein GI | 124024977 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTCGT TTTCCCCTAC TGAAGATACT ATTGCTGCAA TTGCAACTGC CGTTTCTCCC
GGCCAAGGAA GTATTGCTGC CATTAGGATA TCTGGCTCCT CTGCAATTGA GACCAGTAAG
AATATTGTTG ATGTTCCGGG AATTCAGGAT TGGAGCACTC ACAAAGTGCT TTACGGTCAT
GTAACTGAAG AAAATCGAAA AAAATATATT GATGAAGTTT TAATTCTCGT AATGAAAGGG
CCGAGAAGCT TTACAGGTGA AGATGTAGTA GAAATTCATT GCCATGGTGG AATTATTCCA
GTCCAGAAGA TCCTTGAAAG AATACTAGCT TTCCCCAGCG TGCGAAGAGC AGAACCAGGT
GAGTTTAGTC AACGAGCAGT GCTTAATGGT CGTCTTAGCC TGACTCAAGC AGAATCAATT
AGTGAGCTGG TGTCAGCAAG GAGTCGAAAA GCAGCAGAAC TCGCAATTAA TGGAATTGAA
GGAAATATTC AAACTACGAT TCAATCAATC AGAAAGCGAT TAATAGAGCA ACTAACGGAA
ATTGAAGCAA GAATAGATTT TGAAGAAGAT CTACCACTTT TAGATGAAAA ACATGTAAAG
AATGAAATTG TCGCAATTAA AAAAGATCTT AACGAACTAA TTGATAATGC TAAAAGAGGA
TCTTGGGTTC GTTCTGGCTT AAAAGTTGCA CTAGCTGGGA AGCCTAATGT AGGGAAAAGC
TCCTTAATGA ATAGGCTCTC CAAACAAGAG AAGGCCATTG TGACTGACCT ACCTGGCACC
ACTAGAGATA TTTTGGAAAG TGAGATTGTC TTAGAGGGAA TACCAGTAAC TTTTATTGAT
ACAGCAGGTC TAAGAGACAC CAAAGACATC ATCGAAAAAA TTGGTATATC TAGAACTAAA
AAAACTTTAA TTCATGCTGA TCTTATTATA TTAATCTTTG ATTATTCAAG CGGATGGACT
AACGAGGATG AATCAATACT AAAACAATTA CCCGTAAATA TTCCACTCTT GATTGTTGGT
AATAAATCTG ATTTAATGAA TGATCAATCT TTTGAAAAAG TTCCAAAATA TATATTAAAA
AAAGAAAATC TAGTTATTTT AAGTGCAAAA ACAGGAAATG GAGAAGACGA TCTAATTAAT
TACCTACTAA AAAAATGTGG TTCTTCTCAA ACGCATGGAT TGGATATTGC TCTAAATGAA
AGACAACTTG ATCTAGCAAA ATCAACGACG GAATCCCTAG AAAATATTAA TAAAGTTTTT
GACGAAAAGC TACCATGGGA TTTCTGGACG ATAGATTTAA GACAAGCTAT TAATTATTTA
GGAGAACTAA CAGGAGAGGA TTTAACAGAA AATTTACTTG ATAATATATT TTCAAAATTC
TGTATTGGTA AGTAA
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| Protein sequence | MNSFSPTEDT IAAIATAVSP GQGSIAAIRI SGSSAIETSK NIVDVPGIQD WSTHKVLYGH
VTEENRKKYI DEVLILVMKG PRSFTGEDVV EIHCHGGIIP VQKILERILA FPSVRRAEPG
EFSQRAVLNG RLSLTQAESI SELVSARSRK AAELAINGIE GNIQTTIQSI RKRLIEQLTE
IEARIDFEED LPLLDEKHVK NEIVAIKKDL NELIDNAKRG SWVRSGLKVA LAGKPNVGKS
SLMNRLSKQE KAIVTDLPGT TRDILESEIV LEGIPVTFID TAGLRDTKDI IEKIGISRTK
KTLIHADLII LIFDYSSGWT NEDESILKQL PVNIPLLIVG NKSDLMNDQS FEKVPKYILK
KENLVILSAK TGNGEDDLIN YLLKKCGSSQ THGLDIALNE RQLDLAKSTT ESLENINKVF
DEKLPWDFWT IDLRQAINYL GELTGEDLTE NLLDNIFSKF CIGK
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