Gene NATL1_02611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_02611 
Symbol 
ID4779785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp238509 
End bp239624 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content36% 
IMG OID640083526 
Productaminotransferases class-I 
Protein accessionYP_001014090 
Protein GI124024974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.620697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TAGAAAATTC ATTTGTTGAT CTACCAAACC CCAGGAAAGA TATCGAGGAT 
TTACAGCCAT ATTCAGCACC ACTGGAAGGA AGACGAAATT TACTAAGACT AGACTTTAAT
GAAAACACTA TTGGACCAAG CCCACTAGTA CTTAAATCTC TCAGAGAAAT AAGCAGAGAT
GAAATCTCTG TTTATCCTGA ATACTCAGGT TTAAAAGAAA AAGTAGTAGA GAGTCTCATC
AAAAAAAATT CAAATGTGAA TATCAACTCA TCTGAAGTTG GTATTTTTAA TGGAGTAGAT
GCAGCAATAA ATGCTATTTT TCACGCATAT GGCAACTTTG ATGATCTAAT GCTAACAACA
TCGCCTACTT TTGGATATTA TACTCCTTGC GCACAAATGC GAGGAATGCA AATCAAAGCA
ATACCTTATG AGGGAGGGGG ATTTCAATAT CCATTTGATA GTATTTGCGA ATTCCTCACG
CAAAATAATC CGAAAATTTT ACTCATCTGC AACCCCAATA ACCCCACTGG AACAAGATTA
AGCCCAGAAA GAATTATAGA AATCAGCAAA CTTTCATCTA AAACACTCGT TGTTGTGGAT
GAACTTTACG AGGCGTTTAC AGGTGATAGT GTTCTGCCAT TTGTAAATTT CCAAACAACA
CCTAATCTTG TTGTATTAAG ATCGCTTTCT AAAACAGCTG GTTTAGCAAG TCTAAGAATT
GGATTTGCTA TTGGTCATTC TAAAGTAATT AATATAGTTA ATAGAGTTAC TGGTCCTTAT
GACGTCAACA GCTTTGCCGT GATCGCTGCT TTTGCAGCAC TTAAAGATCA ATCTTATATT
GACTCATATG TACAGGAAGT GCTTGAGGCT CGTAATTGGA TCAAGGATCA ATTCGAGAAG
CACCACGTCA AGCATCATAT TGACGGAGGA AACTATTTTC TACTTTGGCC AAAATCAAAA
CCACAACAAG TTGAGCAAAA GCTAAAATCA TCTGGAATTC TAATTAGAAA TATGGATAAG
AAAAAAAATT TAAAAGGCTC TATCAGAGTG AGCATAGGAA CCATTGACCA AATGAAAAGA
TTCTGGTCAG CTTTCAGAAT TGTCGACGAA GTATAG
 
Protein sequence
MENIENSFVD LPNPRKDIED LQPYSAPLEG RRNLLRLDFN ENTIGPSPLV LKSLREISRD 
EISVYPEYSG LKEKVVESLI KKNSNVNINS SEVGIFNGVD AAINAIFHAY GNFDDLMLTT
SPTFGYYTPC AQMRGMQIKA IPYEGGGFQY PFDSICEFLT QNNPKILLIC NPNNPTGTRL
SPERIIEISK LSSKTLVVVD ELYEAFTGDS VLPFVNFQTT PNLVVLRSLS KTAGLASLRI
GFAIGHSKVI NIVNRVTGPY DVNSFAVIAA FAALKDQSYI DSYVQEVLEA RNWIKDQFEK
HHVKHHIDGG NYFLLWPKSK PQQVEQKLKS SGILIRNMDK KKNLKGSIRV SIGTIDQMKR
FWSAFRIVDE V