Gene NATL1_02431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_02431 
SymbolchlM 
ID4779602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp224307 
End bp225008 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content35% 
IMG OID640083508 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_001014072 
Protein GI124024956 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AAATTGAGAA AAATGAAAAG GCGGAAGTCA CTGAATATTT TAATGGGACT 
GGGTTTGATA GATGGAATCG AATATATAGC GAAAGTGATG ATGTAAATAA AGTGCAAAAA
AATATAAGGA TAGGTCACCA AAAGACAGTT GATGATGTCA TTAGTTGGTT GAAAGAGTAT
GACAATATCA AGGATAAAAG TTTTTGTGAT GCTGGCTGTG GTGTTGGTAG TTTAAGTATT
CCATTGGCAA AATTGGGTGC TAAATCAATT CATTTAAGTG ATATTTCTGA AGCCATGATA
AACGAGACAA AAAGTAGGGC AAAGGAAGAA GGTTTGGACT TCAATAAGCT GAATTTTCGA
ACATCTGATT TAGAAAATTT AAAAGGTTCA TTTAATACAG TTGTTTGCTT AGATGTTTTC
ATTCACTACC CTCAACAGAA GGCTGAGGCA ATGGTGAAAC ATCTATGTGA ATTATCTGAT
GAGAGATTAA TTGTTAGCTT TGCACCATAC ACTCCTTTAC TAGCCCTTTT GAAAGGTATT
GGTCAGCTAT TCCCTGGACC AAGTAAAACT ACTAGGGCAT ATACATTAAG GGAGTCCGGA
ATTATCGAAG CTGCAAAGCA ATCTGGCTTT AAAGTTGTCA AAAGCAAGTT GAATCAAGCT
CCTTTTTATT TTTCGAAATT AATAGAATTT GTGAAATCCT AG
 
Protein sequence
MTTQIEKNEK AEVTEYFNGT GFDRWNRIYS ESDDVNKVQK NIRIGHQKTV DDVISWLKEY 
DNIKDKSFCD AGCGVGSLSI PLAKLGAKSI HLSDISEAMI NETKSRAKEE GLDFNKLNFR
TSDLENLKGS FNTVVCLDVF IHYPQQKAEA MVKHLCELSD ERLIVSFAPY TPLLALLKGI
GQLFPGPSKT TRAYTLRESG IIEAAKQSGF KVVKSKLNQA PFYFSKLIEF VKS