Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_02371 |
Symbol | pspE |
ID | 4779573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 219802 |
End bp | 220158 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640083502 |
Product | rhodanese-like protein |
Protein accession | YP_001014066 |
Protein GI | 124024950 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA ATATTCCTTT AAATATATCT CCAAAAGAGT TAAATAAAAT CTTAGAAGAT GATTCTTCTG AAAAACCATT TATTGTAGAT GTGAGGGAGG ATAATGAAAT TGCTATTGCC TCATTTTCAT TCTCAGTATT ACATCTACCT TTGAGCAAGG CTGCAAACTG GTCAGACAAA ATAGGTGAAC TGTTGCCGAA GGATCAGCCT GTTGTCGTTA TTTGCCATGC GGGTGTGAGA AGTCTGAATT TTGGTATTTG GCTTCTAGAA CAAGGAATAG CTAAAAGTGT TTGGAATCTT GTCGGAGGAA TAGATGCTTG GAGCACAGAT GTTGATCAAT CTGTTCCAAG GTATTAA
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Protein sequence | MNQNIPLNIS PKELNKILED DSSEKPFIVD VREDNEIAIA SFSFSVLHLP LSKAANWSDK IGELLPKDQP VVVICHAGVR SLNFGIWLLE QGIAKSVWNL VGGIDAWSTD VDQSVPRY
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