| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02261 |
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| Symbol | csgD |
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| ID | 4779246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 212018 |
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| End bp | 212290 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640083491 |
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| Product | LuxR family regulatory protein |
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| Protein accession | YP_001014055 |
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| Protein GI | 124024939 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0250136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACAG GAGAGATCGC TAATTCGTCC CACATGGGAC TCTCAGCTAG GGAAATGGAG
ATCATTGGAT TAGTTGCAGA TGGCCTGACT AATCAAGAGA TTGCTGAAAG GCTCACAATT
AGCAAAAGGA CGGTAGACAA TCATGTCAGC AATATGTTCA CAAAAACAGG TTCGAAAAAC
AGAGTGGCTT TATTGAACTG GGCCATGGAC CATGGAAAAA TCTGCCGAGA TGGGTTCAAT
TGTTGTTCAT TGCCCGATGA AACAGATACT TAA
|
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| Protein sequence | MFTGEIANSS HMGLSAREME IIGLVADGLT NQEIAERLTI SKRTVDNHVS NMFTKTGSKN
RVALLNWAMD HGKICRDGFN CCSLPDETDT
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