| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02211 |
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| Symbol | ndhF |
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| ID | 4779278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 205104 |
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| End bp | 207110 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640083486 |
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| Product | NAD(P)H-quinone oxidoreductase subunit F |
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| Protein accession | YP_001014050 |
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| Protein GI | 124024934 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.292389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCGG CTGCAGATTT TGCTTGGTTA ATCCCACTTC TTCCACTTTG TGGGGCAGTT
TTAATTGGTT TGGGATTAAT TAGTTTTAAC GATCTTTTTA ATCGTTCAAG GAAACCCGTG
GCAATAACCT TGTTGACTTC CGTAGGTGCT TCGGCATTTA TTAGCTATGC AGTTTTAGCC
GAGCAACTCT CAGGTAAACC TCCAGTTGAG CACTTGTTTA TTTGGGCTAG TGCAGGCTCA
TTTGAGTTGC CAATGGGTTA TGTGATTGAT CCTCTTGCGG CAGTCATGCT CGCTCTTGTA
ACTACAATCG CTTTCTTGGT AATGATTTAT TCCCATGGTT ATATGGCACA TGATCCTGGG
TATGTTCGTT TTTTTACTTA TCTAGCCTTA TTCAGCAGCT CAATGCTTGG TCTAATTGTT
AGTCCAAATT TGCTTGAAAT ATATGTTTTT TGGGAATTGG TTGGTATGTG TTCATATTTA
TTAGTTGGCT TTTGGTATGA CAGAGACGGT GCTGCACATG CAGCTCAAAA GGCTTTTATC
GTAAATAGAG TGGGTGACTT TGGCTTATTG CTTGGAATTT TGGGTCTTTT TTGGGCGACA
GGTAGCTTTG ATTTTCATGG CATAGCTGAT GGTTTATCAG TTGCAGTTGG TTCTGGGAAT
GTACCAATGT GGGCGGCTTT GACTCTTTGC ATACTTGTCT TTATGGGGCC AATGGCTAAG
TCTGCACAAT TTCCATTGCA TGTTTGGTTG CCCGATGCAA TGGAAGGTCC AACTCCCATA
TCTGCTCTTA TCCATGCAGC AACAATGGTT GCAGCAGGAG TTTTTTTAGT AGCAAGGCTT
GATCCTTTGT TTAGCCAGTT CCCTTTCGTT GGATTATTTA TCGCACTTAT TGGAACTATC
ACTTGTTTCC TAGGTGCATC TATCGCTTTG ACTCAAATGG ACTTGAAAAA AGGGTTGGCT
TACAGCACAG TTTCTCAACT TGGATACATG ATGCTTGCGA TGGGATGTGG TGCACCAGTT
GCAGGAATGT TCCACCTTGT TACTCATGCT TGTTTTAAGG CCATGTTATT CCTTGGTTCA
GGTTCAGTGA TTCATGCCAT GGAGGAGGTC GTTGGTCATG AACCAATTCT TGCTCAAGAC
ATGCGATTGA TGGGAGGTCT ACGTAAAAAA ATGCCTATTA CAGCAATAAC TTTTTTCATT
GGCTGCATTG CTATTAGTGG CATACCTCCT CTCGCAGGTT TTTGGAGTAA AGATGAAATT
CTAGGTCAAG CTTTTAACAG TTTTCCAATT CTTTGGTTTA TTGGTTTTTT AACGGCAGGA
ATGACAGCTT TCTACATGTT TAGGCTTTAT TTTCTAACTT TTGAGGGCGA CTTTCGCGGC
GAAAATAAAG AGATGCAGCT TTCTTTGCTT TCTTTAGCAG GCAAAGACAA AGATGAAGAG
CATGAAGATC ATGAAATTGG CAAAATACAT GAATCTGCGT GGCCCATGAC ATTTCCCTTG
GCAGTTTTGG CAATTCCTTC TGTCCTGATT GGATTTATAG GTGTTCCTTG GAACAGCATT
TTTGCAAACT TGTTAGATCC TGTTGAGGCT ATTGAAGCTG CAGAAAAGTT TAGTTGGGGA
GAATTTCTTC CACTTGCAAC TGCCTCAGTA GCAATCTCAT CCGCAGGGAT ATTATTGGCT
GTCTTGACTT ATTATTTAAA AAGATTTGAT CTTGGTGTTT CTCTATCCAA GAAGTACCCT
CAAATCAATT CATTTCTTCA GAACAAATGG TATTTAGATG ATATAAATGA GAAGATTTTT
GTAAAAGGTA GTAGAAAACT CGCAAGAGAA GTACTAGAAG TCGACGCAAA AGTAGTTGAT
GGAGTTGTCA ATCTGACTGG ATTATTGACT CTTGGTAGTG GAGAAGGGCT TAAATATTTT
GAGACAGGAA GAGCTCAGTT TTATGCATTG ATTGTTTTTG GAGGAGTAAT TGCTCTGGTT
GCACTTTTTG GAGTTGTTGG TGCATGA
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| Protein sequence | MHSAADFAWL IPLLPLCGAV LIGLGLISFN DLFNRSRKPV AITLLTSVGA SAFISYAVLA
EQLSGKPPVE HLFIWASAGS FELPMGYVID PLAAVMLALV TTIAFLVMIY SHGYMAHDPG
YVRFFTYLAL FSSSMLGLIV SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFI
VNRVGDFGLL LGILGLFWAT GSFDFHGIAD GLSVAVGSGN VPMWAALTLC ILVFMGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL DPLFSQFPFV GLFIALIGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGMFHLVTHA CFKAMLFLGS
GSVIHAMEEV VGHEPILAQD MRLMGGLRKK MPITAITFFI GCIAISGIPP LAGFWSKDEI
LGQAFNSFPI LWFIGFLTAG MTAFYMFRLY FLTFEGDFRG ENKEMQLSLL SLAGKDKDEE
HEDHEIGKIH ESAWPMTFPL AVLAIPSVLI GFIGVPWNSI FANLLDPVEA IEAAEKFSWG
EFLPLATASV AISSAGILLA VLTYYLKRFD LGVSLSKKYP QINSFLQNKW YLDDINEKIF
VKGSRKLARE VLEVDAKVVD GVVNLTGLLT LGSGEGLKYF ETGRAQFYAL IVFGGVIALV
ALFGVVGA
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