| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02191 |
|---|
| Symbol | rbcR |
|---|
| ID | 4779294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 203273 |
|---|
| End bp | 204223 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640083484 |
|---|
| Product | putative Rubisco transcriptional regulator |
|---|
| Protein accession | YP_001014048 |
|---|
| Protein GI | 124024932 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.989894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA TTCCATTCAC TCTTGATCAA CTAAGAATCC TCAAAGCAAT CGTTGATGAG
GGGAGCTTCA AAAAAGCTGC AGATAGTCTC TTTGTGACTC AACCGGCTGT AAGTTTGCAA
GTGCAAAATC TTGAAAAACA ACTAGATATT GCCATATTTG ATAGAGGTGG AAGAAAAGCA
CAACTAACTG AAGCTGGAAA GCTTCTTCTA AATTATTGTG AGAAAATTTT AGGAGAATGC
CTAGAGACTT GCAAAGCAGT TGAAGATTTA AATAATCTCA AAGGGGGATC CATCATTATT
GGTGCTAGCC AAACTACTGG TACTTACTTA ATGCCAAGGA TGATTGGAGT TTTCAGACAA
AAGTATCCAG AAGTTTCTGT TCAACTTCAA ATTCATAGCA CTAGAAGAAC AGGATGGAGT
GTTGCTAATG GCCAGATAGA TATTGCCATT ATCGGAGGCC AACTGCCATT AGAATTAAAT
GAATTATTAG AAGTTATTCC TTTTGCGACA GATGAGTTAG CTCTTGTTTT ACCTACTAAT
CATCCATTAG CAAAGTCAAA AGAGCTCACA AAAGAAGATC TATACAGTCT TAGGTTTATA
ACATTAGACA ACCAATCAAC CACAAGAAAA GTCGTAGATC AACTATTGTC CTCTTCAGGA
TTAGACGTAC AGAGGTTACA TATAGAAATG GAATTAAACT CTCTTGAAGC TATAAAAAAT
GCTGTTCAAT CAAATCTAGG AGCAGCTTTT CTCCCCGTAG TATCAATTGA AAGAGAATTA
TCGGGAGGCA GTATTCACAG ACCAATCGTG GCAGACCTAG AAGTCAAAAG AGAACTGAAA
GTAATCACCA ATCCTGGCAG ATATTCATCT AGAGCTGCAG AAGCATTCAC ACGAGACATA
TTACCTCTAT TTGCTAGTTC ATTTTCACCA CTATTTAATC CTCAAAATTA A
|
|---|
| Protein sequence | MAEIPFTLDQ LRILKAIVDE GSFKKAADSL FVTQPAVSLQ VQNLEKQLDI AIFDRGGRKA
QLTEAGKLLL NYCEKILGEC LETCKAVEDL NNLKGGSIII GASQTTGTYL MPRMIGVFRQ
KYPEVSVQLQ IHSTRRTGWS VANGQIDIAI IGGQLPLELN ELLEVIPFAT DELALVLPTN
HPLAKSKELT KEDLYSLRFI TLDNQSTTRK VVDQLLSSSG LDVQRLHIEM ELNSLEAIKN
AVQSNLGAAF LPVVSIEREL SGGSIHRPIV ADLEVKRELK VITNPGRYSS RAAEAFTRDI
LPLFASSFSP LFNPQN
|
|---|
| |