Gene NATL1_02101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_02101 
Symbol 
ID4779581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp196380 
End bp197066 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID640083475 
Productputative 1-acyl-sn-glycerol-3-phosphate acyltransferase 
Protein accessionYP_001014039 
Protein GI124024923 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACAAT TTAGAGTCGT TACCGGAGTT GAAAAAATCT ATAAAAATAG ACCTCGACAA 
AGTTTCGTTT ATGGTTGCGT CAGTTATCTA TTCGTTTTTC CTATATTTCG TTTTTTGTTT
CGAGGTAAAA CAATTGGGAT TTCGAATTTA CCTAAGACAG GAGGCGTTGT AGTTGTTTCT
AATCATGGTT CTCATCTGGA CCCCCCGATT TTGGGTCATG CTTTAGGTAG ACCAGTAGCT
TTCATGGCAA AAGCTGAACT TTTCAAGGTG CCCATATTGT CATTCATAAT TTCTTGTTGT
GGTGCCTATC CAGTTAAGAG AGGAGCTGGA GATAGAGAGG CAATAAGAAA TGCCTCTAAT
CGATTAATTG AAGGTTGGGC TACAGGTGTG TTTTTGGATG GAACCAGACA AAAAAATGGG
AGAGTTAACG ACCCTAAAGC AGGAGCTGCT CTCTTGGCTG CGAGGACAGG TTCCCCTATT
CTTCCTGTGG CAATAATTAA TAGTCACAGG GCTTTCCCAA AAGGATCTCT TCTTCCAAGA
CTTGTATCTA TTCATTTAAG AGTTGGTGAG TTAATCCAAC CTCCTCAAAC AAAGAAAAGA
GAAGATTTAA AATCAACAAC TAAAGAAATT CAAATATCTA TAAATTCAAT GTTGGATGAA
GGCCTAATAC AGAATACCTG CAATTAA
 
Protein sequence
MEQFRVVTGV EKIYKNRPRQ SFVYGCVSYL FVFPIFRFLF RGKTIGISNL PKTGGVVVVS 
NHGSHLDPPI LGHALGRPVA FMAKAELFKV PILSFIISCC GAYPVKRGAG DREAIRNASN
RLIEGWATGV FLDGTRQKNG RVNDPKAGAA LLAARTGSPI LPVAIINSHR AFPKGSLLPR
LVSIHLRVGE LIQPPQTKKR EDLKSTTKEI QISINSMLDE GLIQNTCN