Gene NATL1_01951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01951 
Symbol 
ID4780838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp181234 
End bp182202 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content41% 
IMG OID640083459 
ProductO-acetylserine (thiol)-lyase A 
Protein accessionYP_001014024 
Protein GI124024908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.958038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.621094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTG CTAATGACAT AACTTATTTA GTTGGCCAAA CACCTTTGGT CAAACTGAAT 
CGATTACCTA ATGAATTTAA TTGTAGGGCT GAAATTATAG CCAAATTAGA AAGTTTCAAC
CCCACAGCAT CCGTAAAAGA CCGCATAGCT GGAGCAATGG TGAAATCAGC AGAAAAAGAG
GGCACTATCA AACCTGGACA TACTGTTCTT GTTGAACCAA CTAGCGGAAA CACAGGAATT
GCATTAGCGA TGGTTGCGGC AGCAAAAGGT TATCGGCTCA TACTTACAAT GCCTGACACA
ATGAGTACTG AACGACGCTC AATGTTAAGA GCATTTGGAG CAGAGCTTCA ACTAACTCCT
GGCCAAGACG GTATCCAAGG CGCTATTCAG CTAGCAAAGG AATTGGTTGC TTCTGTACCT
AATGCATACT TGCTTCAGCA ATTCGATAAT TTATCCAATC CTGAAATTCA TGAAAAAACA
ACCGCTGAAG AAATATGGGA AGATTGCGAA GGCAAACTTG ATGCATTAAT TGCAGGAGTA
GGAACAGGAG GAACAATCAC AGGTTGTGCC AGATTCTTAA AACAAAAAAA TCCAAAAATC
AAGGTTTTTG CAGTAGAACC TTCATCAAGC CCTGTTCTGT CAGGAGGGAA TCCTGGATCT
CATGCGATAC AAGGCATTGG GGCTGGTTTC ATTCCTAATG TATTAGATAT GAATCAGATT
GATGAAGTCA TAAGAATCAA TGATAATGAA GCAATGGACA TAGGCAGAAG ACTTGCCAAA
GAAGAGGGAT TGCTAAGTGG TGTCAGCAGT GGTGCTGCAG TAGCCGCTGC TTTAAAAGTA
GGAAATCAAC CTGAGTTTGC GAATAAACGC TTGATTGTTA TTCTGCCTAG TTTTGGTGAA
AGATATCTAT CAACAACAAT GTTTACTTCT ATCCCCGCAA AGCCAGTAAA AGGGAATGAG
TTTCTCTAA
 
Protein sequence
MPIANDITYL VGQTPLVKLN RLPNEFNCRA EIIAKLESFN PTASVKDRIA GAMVKSAEKE 
GTIKPGHTVL VEPTSGNTGI ALAMVAAAKG YRLILTMPDT MSTERRSMLR AFGAELQLTP
GQDGIQGAIQ LAKELVASVP NAYLLQQFDN LSNPEIHEKT TAEEIWEDCE GKLDALIAGV
GTGGTITGCA RFLKQKNPKI KVFAVEPSSS PVLSGGNPGS HAIQGIGAGF IPNVLDMNQI
DEVIRINDNE AMDIGRRLAK EEGLLSGVSS GAAVAAALKV GNQPEFANKR LIVILPSFGE
RYLSTTMFTS IPAKPVKGNE FL