Gene NATL1_01881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01881 
Symbol 
ID4779448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp176266 
End bp176718 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content36% 
IMG OID640083452 
Productputative integral membrane protein 
Protein accessionYP_001014017 
Protein GI124024901 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.560201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGT GGCTTGATCA CACAGTGATA AGTGAAATTC ATGCTCCAGT TGAACTTGTT 
TGGAAGTTTT GGAGTGATTT AGATTCGATG CCTTTGTGGA TGACTTGGAT TGAGTCGGTT
AAGCCAGTCG ATAAAAAAAC CTCGACACTT CCTGATTTAA CGGAGTGGAC ACTTGCAGCT
AATGGCTTTC GTTTCAAATG GAAAGCTCAA ATCACAGAAA GAGTAGAAGC AGAGAAATTG
GAATGGAAAT CAGTTGGTGG TTTACCTACT AAGGGTTCAG TACGGTTTTA TAGTGAAGAG
AGTTCTAAAA CTGTGGTTAA ATTAAAAATA TCTTATGAAT TGCCTCAAGT TTTAGCAAAT
CTAATGAAAG CAAATATTCT TGGAGGAATG GTCACAAAAG AATTACAAAA AAATCTTGAT
GGATTTAAAG ATCTCGTCGA AAAATCAGGA TAA
 
Protein sequence
MGKWLDHTVI SEIHAPVELV WKFWSDLDSM PLWMTWIESV KPVDKKTSTL PDLTEWTLAA 
NGFRFKWKAQ ITERVEAEKL EWKSVGGLPT KGSVRFYSEE SSKTVVKLKI SYELPQVLAN
LMKANILGGM VTKELQKNLD GFKDLVEKSG