Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_01791 |
Symbol | aroK |
ID | 4779632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 170834 |
End bp | 171430 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640083443 |
Product | shikimate kinase |
Protein accession | YP_001014008 |
Protein GI | 124024892 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0539701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCC AATCAACCCC TAAAACTCTT AAAGAAAAGT TAGGTGGTCG AAATATATTT TTGATAGGAA TGATGGGTTC TGGCAAAAGT CAAACGGGTC CAGTTCTAGC AAAAATGATC AATTATGCTT TTGTTGATAC TGATGATGTT ATAGAAAAAG CGTCTAAACA ATCTATTTCA TCTATTTTTG AAAAAGATGG AGAAAAAGTC TTTAGGGATG TTGAAAAAAA AGTTTTAAAA GAAATTAGTC AACATCATTC TCTTGTAATT GCTACCGGAG GGGGTTTAGT TACCTTGCCT GAAAACTGGG GCATTCTTCA TCAAGGAATA GTTATTTGGT TAGATCTTGA TTTGAGACGT TCAATTAAAC GATTAGAAAG TGATCAAAAG AGACGCCCTT TACTACTTGG GGATAATTTA GCTGAGAATT TTAGTCAGAT TTATGAAAGT AGAAAACCAA TATATTTAGA GTCAGATTTG AGAATAGAAG TTGAGGATCA ATCACCATAT GAGGTCGCTA CTATGGTTGC TGAACATTTG CCAAGCATCC TTATTGACCC GGAGACTCAA GCCGAACGGC ATACCACTGA ATTGTAA
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Protein sequence | MAVQSTPKTL KEKLGGRNIF LIGMMGSGKS QTGPVLAKMI NYAFVDTDDV IEKASKQSIS SIFEKDGEKV FRDVEKKVLK EISQHHSLVI ATGGGLVTLP ENWGILHQGI VIWLDLDLRR SIKRLESDQK RRPLLLGDNL AENFSQIYES RKPIYLESDL RIEVEDQSPY EVATMVAEHL PSILIDPETQ AERHTTEL
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