| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_01781 |
|---|
| Symbol | |
|---|
| ID | 4780162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 169855 |
|---|
| End bp | 170781 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640083442 |
|---|
| Product | 6-pyruvoyl tetrahydropterin synthase |
|---|
| Protein accession | YP_001014007 |
|---|
| Protein GI | 124024891 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
|---|
| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0595468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAA TCACATCGAA TTTCCCTCAC GGAGAGGGGA GAACCTGTGT AATCACAAGG
CGAGCCTGCT TTAGCGCAAG CCACCTTTAT AGGCTTCCTG AATTATCTGA TGATGATAAT
TCAGCTTTGT TTGGCCCATG CTCAATAGCT CCTGGCCACG GACATAATTA CGAGTTAATC
GTAACCATGG AAGGAGATCT TAATAAATAT GGCATGGTCT TAAACCTCTC AGATGTAAAA
TATGCAATAA AAAATGAAGT AACAAGTCAG CTTGACTTTC GTTTTTTAAA TGACACATGG
CCTGAGTTTG ACCTTTCTAA ACCCGAAGGT TGCTTGCCCA CAACTGAAAG TTTAGTTCGT
ATTATATGGG AGCGCCTTAA ATCTCACTTA CCCCTAAAAT CTCTTCGTCT TTACGAAAAC
CCAAAACTCT GGGCTGACTA TCAAGGAAAT GCTATGGATG CTTATTTAAC AGTTCAAACA
CACTTTTCGG CTGCTCATCG CTTAGCCAGA GAAGACCTAC CTCAAACCGA AAACGAAAAA
ATATTCGGAA AATGTGCTCG ACCTAATGGA CATGGTCACA ATTACTTAGT AGATATAACT
GTCAAAGGGA AGATTAATCC TAGAACTGGA ATGATATGCG ATTTATCTGC ATTAAATAGT
TTAATAAATG ATTTAGTTGT AGAACCTTTT GATCATACCT TTTTAAATAA AGACATTCCT
TATTTTGCAA ATTGTGTACC TACAGCTGAA AATATTGCAT TACACATTTC AGATAAATTA
ACTAATCCAA TTAATGCGAT TGGGGCTAAT TTATATAAGA TAAAGCTACA GGAAAGTCCT
AATAATGCTG CAGAAGTTTA TGCAAACCTA CCTGAATCAA CAATCGATAC CAAAGACTCT
AAGAATCAGG TTGGTTTGCT GAGATAA
|
|---|
| Protein sequence | MEAITSNFPH GEGRTCVITR RACFSASHLY RLPELSDDDN SALFGPCSIA PGHGHNYELI
VTMEGDLNKY GMVLNLSDVK YAIKNEVTSQ LDFRFLNDTW PEFDLSKPEG CLPTTESLVR
IIWERLKSHL PLKSLRLYEN PKLWADYQGN AMDAYLTVQT HFSAAHRLAR EDLPQTENEK
IFGKCARPNG HGHNYLVDIT VKGKINPRTG MICDLSALNS LINDLVVEPF DHTFLNKDIP
YFANCVPTAE NIALHISDKL TNPINAIGAN LYKIKLQESP NNAAEVYANL PESTIDTKDS
KNQVGLLR
|
|---|
| |