| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_01711 |
|---|
| Symbol | nadB |
|---|
| ID | 4781032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 164231 |
|---|
| End bp | 165931 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640083435 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001014000 |
|---|
| Protein GI | 124024884 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.507615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA ATACTGGGTT TAATAAAAAT GATATTTACT CAACTAATTG GGATGTAATT
GTTATTGGAG CAGGAGCTGC AGGTTTGATG TCATCTCTTG AGTTGCCATC AAATCTGAAA
ATTTTACTTT TAAACCGCAA TACCAGTAAG CGTTCTTCTA GTAGATGGGC ACAAGGAGGA
ATGGCTGCTG TTACTCGAAT TGAAGATAGC GAGGATATTC ATGCTAACGA CACAATCAAA
GCTGGGGCAG GCCTTTGTGA TTTAGAAGCA GTTCAGATGT TTGTTCATAG TGCTCCGAGA
TTGGTAGATA GACTTTTGAA ACTAGGAATG GAATTTGATA GAACCTCTGG AAAATTATCT
ACAACTCTTG AAGCTGCTCA CACTCATAGA AGAGTGCTTC ACGTAAAAGA TAGAACTGGT
AAGGCATTGG TTGATGTCCT TAATGAGCAA GTTGATCAAA GAGGTAATGT TCTGCATCAA
AGAGGAATAA GAGTTACTCA GATTTGGGTT GAAAGAGGAA AATGCTCCGG GGTACAAGTT
CTAGATGGAC CAGCTTTGCG TTGGATCAAA GCAAAGGCAG TTGTTTTAGC TACTGGCGGC
GGAGGCCATT TATTTGCCAA TACTACAAAT CCAACTCAAG CAGCAGGTGA GGGAATTGCT
CTAGCTTGGA GATCTGGGGC TTGCATAGAA GATCTCGAAT TTTTTCAGTT TCACCCAACT
GCTCTGAAAT TGGATAATGC GCCTTCGTTT TTGATTTCTG AAGCGGTAAG GGGAGAGGGC
GCAGTTTTAG TGGATTCATT CGGCGAGAGT CCCGTAGCTC ATCTTGAAGG GAAAGATCTT
GCATCAAGAG ATCAAGTCAG CAGGGCATTG TTTCAAGCGA TGCAAAAGCA AAAAGTTGAT
CACATTGGTC TTGATGTTAA ATCCATTTCT GTTGAGGATG TAGAAGCGCG CTTTCCGTCA
ATTTTTCAAA GGTGCAGAGA ACTTGGCTTA GAACCTTTAA AAGAAGCAAT CCCTGTGGCT
CCCTCTGCCC ATTATTGGAT GGGTGGTGTC GCTACAAACT TGAAAGCACA AACAAATGTC
AAAGGACTTT TCGCGATTGG TGAGGTGGCA TGTACTGGCC TGCATGGTGC CAATAGACTT
GCAAGTAATT CATTAATGGA ATGTTTGGTC TTTGCAAATC AAATGAGAAA TATTGAATTA
AATGATTTTA TAACTTCCGA TATTTCAGGA AATAATTTAA GTTTTAACAA ATCAGATCTT
CGCTTTTCTA AGGAGCAAGG AACTAGTTAT TTATCAAAAG AAATTGAAAA ACTTAGACAA
TTATGCTGGC GTGAAGCTGG AGTTGATCGA TCACGAAAAG GAATGAATTC TGCTCTTGTA
AAAGTTAAAC AAGATTATCA AAATCTTTTA ACCGAGCCCT TATTAAATTT GGTTTTTTCT
CAGTCAAAAT ATGAAATTCA TGAATTCGAG GAACTTGCTA GGAGAGACCT TAATTTGCTA
CTTGATTTGA GTAATCGACA AATGTCAAGT TTGCTTATGT TGGAAGCTTG TTTGTTTCGT
GAAGAAAGTA GAGGAGGTCA TTTTAGAGAT GATTTCCCTA CCTCAGTTCC TTTTTGGCAA
TGTCATACTA GACAAATGAA GGGAAAGAAC ATTCATACAA GACCCATTGT CGATAAAGCT
GGCTTCCCTA AAAATCTTTA G
|
|---|
| Protein sequence | MDLNTGFNKN DIYSTNWDVI VIGAGAAGLM SSLELPSNLK ILLLNRNTSK RSSSRWAQGG
MAAVTRIEDS EDIHANDTIK AGAGLCDLEA VQMFVHSAPR LVDRLLKLGM EFDRTSGKLS
TTLEAAHTHR RVLHVKDRTG KALVDVLNEQ VDQRGNVLHQ RGIRVTQIWV ERGKCSGVQV
LDGPALRWIK AKAVVLATGG GGHLFANTTN PTQAAGEGIA LAWRSGACIE DLEFFQFHPT
ALKLDNAPSF LISEAVRGEG AVLVDSFGES PVAHLEGKDL ASRDQVSRAL FQAMQKQKVD
HIGLDVKSIS VEDVEARFPS IFQRCRELGL EPLKEAIPVA PSAHYWMGGV ATNLKAQTNV
KGLFAIGEVA CTGLHGANRL ASNSLMECLV FANQMRNIEL NDFITSDISG NNLSFNKSDL
RFSKEQGTSY LSKEIEKLRQ LCWREAGVDR SRKGMNSALV KVKQDYQNLL TEPLLNLVFS
QSKYEIHEFE ELARRDLNLL LDLSNRQMSS LLMLEACLFR EESRGGHFRD DFPTSVPFWQ
CHTRQMKGKN IHTRPIVDKA GFPKNL
|
|---|
| |