Gene NATL1_01351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01351 
Symbol 
ID4780456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp131940 
End bp133178 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content32% 
IMG OID640083399 
ProductABC transporter, membrane component 
Protein accessionYP_001013964 
Protein GI124024848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.228758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAT CAACTATTTG CCAAGATTGG CTTGACTCTC TTCCTCTAAC TGATGGTTAT 
TTAAAAAACG AACAATCAAT AGGACGAGAA TTTCTCCTAG AGAAAGGGAT GCCCTCCAAG
AAAGATGAAG CGTGGCGATT ATCCAACTTC AATAAGTTAA ATAGTTTTTT ATCGTTACCA
ACGATTATCG ATAGCAAAGG TATTAAATCT GTCTTTCCAG AAAAGGATGA AAATAGAGAA
AGAATTATAA TTAATCCTAA TGAAAATCCA ATTTTAAATA TTAATTTACC TAATGGAATT
GAAGAGCTAA ATAAAAAAGA GATTGAAGAG AATCTAGGTG AAATAATTAA GTCAACTAAT
ATAAAGAATG ACATATCAGT CTGTCTTAAT CAGGCATCTA GCTTAGAGGT ATTAGCTTTA
AAAGTTAAGC GTAATCACAA CCATTCATTA GAGTTAGTAA TTCCATCGAT AGAGGAAAAG
TCAATCTCAA CTAGAATATT TTTCCTCATA GAAGAAGGAG CAAAATTAGA TCTTTTACAA
ATTTTTCTAG GTAAAAATAA TTCAGCTCAA AATCATTTAA TAGAAATAAA ACTAGAAGCC
CAAGCAGAGT TTACTCATGG GTTTATTTCT TTAGGTGAAG AGAAAGAATC CTCCTCAATT
TGTACTTTAG CTGTAGATCA ATCAGAAAAG AGTAAATATT CTCTACATTC AATTCATCAT
GGTTGGGATT ATGCCCGTTT TGAACCAAGA ATAATTCAAA GTGAAGGAGA AGCTTCAACA
ACTATCAAAG GGCTGCAAGT CACCAAATCA AAAGAGCAAA TAGCTACGCA CTCTTTGATT
AGATTTGAAG GCCCAAATGG AAAGCTTGAT CAATTACAAA AAGCAGTAGC ATCTGAATAT
TCACATTGCA TTTTCAATGG TTCGATTGAA GTTCCTCAAA AAGCACAAAA AACAGAAGCT
GCTCAGCTAA GTAGAAATTT ATTACTTTCT AAACGCGCCA GAATAGATAC AAAACCAGAG
CTTGAGATAG TTGCTGATGA CGTTAGGTGT ACTCATGGAG CGACTGTAAG CCAACTTCAA
GATGAGGAAT TATTTTATTT ACTAAGTAGA GGTATTGATA AGCAATGTGC TAATTCTTTA
TTATTACAAG GATATTATGA TGAAGTGATT TCACACTTTC CTAAAAGTGC TGGCAAATGG
AACTTTATTG AAAAATTAAT ACAAGACATA AAAAAGTGA
 
Protein sequence
MKSSTICQDW LDSLPLTDGY LKNEQSIGRE FLLEKGMPSK KDEAWRLSNF NKLNSFLSLP 
TIIDSKGIKS VFPEKDENRE RIIINPNENP ILNINLPNGI EELNKKEIEE NLGEIIKSTN
IKNDISVCLN QASSLEVLAL KVKRNHNHSL ELVIPSIEEK SISTRIFFLI EEGAKLDLLQ
IFLGKNNSAQ NHLIEIKLEA QAEFTHGFIS LGEEKESSSI CTLAVDQSEK SKYSLHSIHH
GWDYARFEPR IIQSEGEAST TIKGLQVTKS KEQIATHSLI RFEGPNGKLD QLQKAVASEY
SHCIFNGSIE VPQKAQKTEA AQLSRNLLLS KRARIDTKPE LEIVADDVRC THGATVSQLQ
DEELFYLLSR GIDKQCANSL LLQGYYDEVI SHFPKSAGKW NFIEKLIQDI KK