Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_01321 |
Symbol | def |
ID | 4781113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 128073 |
End bp | 128681 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640083396 |
Product | peptide deformylase |
Protein accession | YP_001013961 |
Protein GI | 124024845 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGGCA GTTTTGCTCA ACTTGCAAAA AATGCAGAAA AAAAGAAGCC CTCAATTTCA GTTTCTAAAG AACCTGTCGA GAATCCCCCT TTGAAGGTGT ATCAGCTGGG AGACGAGGCT TTAAGAACTC CAGCTAATCG TATCGTCAAA GTTGATGATG CAATTAGAAA GTTAGCGAAA GATATGCTTA TAACTATGTA TTCATCAAAA GGGATTGGTT TAGCAGCACC TCAAGTAGGA ATACAAAAGA GATTGTTAGT TATTGATTTA AATTTTGAAG ATCCAAATTC TCCACCGATG GTATTTATAA ATCCTGAGAT AATTTCATCT AGTGCAACCG TAGATACATA TGAAGAAGGT TGTCTAAGTA TCCCTGGAGT TTACCTGAAT GTTTTACGAC CCTCCTCAAT CAAATTAAGC TATAGAGATG AAATGGGTAG ACCAAAAAAA ATGAATGCAG ACGGTCTCAT GGCAAGATGC ATTCAGCACG AAATAGACCA CTTAAATGGT GTCTGTTTTG TCGATAAAGT AACTGATGAA GAAGAGCTGA AAAAACAATT AAATGAGAAT AACTTCAAGC GAAGCGATGT AATAAAAGCA ACGAATTGA
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Protein sequence | MAGSFAQLAK NAEKKKPSIS VSKEPVENPP LKVYQLGDEA LRTPANRIVK VDDAIRKLAK DMLITMYSSK GIGLAAPQVG IQKRLLVIDL NFEDPNSPPM VFINPEIISS SATVDTYEEG CLSIPGVYLN VLRPSSIKLS YRDEMGRPKK MNADGLMARC IQHEIDHLNG VCFVDKVTDE EELKKQLNEN NFKRSDVIKA TN
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