Gene NATL1_01321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01321 
Symboldef 
ID4781113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp128073 
End bp128681 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content37% 
IMG OID640083396 
Productpeptide deformylase 
Protein accessionYP_001013961 
Protein GI124024845 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGGCA GTTTTGCTCA ACTTGCAAAA AATGCAGAAA AAAAGAAGCC CTCAATTTCA 
GTTTCTAAAG AACCTGTCGA GAATCCCCCT TTGAAGGTGT ATCAGCTGGG AGACGAGGCT
TTAAGAACTC CAGCTAATCG TATCGTCAAA GTTGATGATG CAATTAGAAA GTTAGCGAAA
GATATGCTTA TAACTATGTA TTCATCAAAA GGGATTGGTT TAGCAGCACC TCAAGTAGGA
ATACAAAAGA GATTGTTAGT TATTGATTTA AATTTTGAAG ATCCAAATTC TCCACCGATG
GTATTTATAA ATCCTGAGAT AATTTCATCT AGTGCAACCG TAGATACATA TGAAGAAGGT
TGTCTAAGTA TCCCTGGAGT TTACCTGAAT GTTTTACGAC CCTCCTCAAT CAAATTAAGC
TATAGAGATG AAATGGGTAG ACCAAAAAAA ATGAATGCAG ACGGTCTCAT GGCAAGATGC
ATTCAGCACG AAATAGACCA CTTAAATGGT GTCTGTTTTG TCGATAAAGT AACTGATGAA
GAAGAGCTGA AAAAACAATT AAATGAGAAT AACTTCAAGC GAAGCGATGT AATAAAAGCA
ACGAATTGA
 
Protein sequence
MAGSFAQLAK NAEKKKPSIS VSKEPVENPP LKVYQLGDEA LRTPANRIVK VDDAIRKLAK 
DMLITMYSSK GIGLAAPQVG IQKRLLVIDL NFEDPNSPPM VFINPEIISS SATVDTYEEG
CLSIPGVYLN VLRPSSIKLS YRDEMGRPKK MNADGLMARC IQHEIDHLNG VCFVDKVTDE
EELKKQLNEN NFKRSDVIKA TN