| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_01211 |
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| Symbol | smc |
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| ID | 4779534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 115731 |
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| End bp | 119336 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640083384 |
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| Product | SMC ATPase superfamily chromosome segregation protein |
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| Protein accession | YP_001013950 |
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| Protein GI | 124024834 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCCATA TCAACCACGT AGATTTGTCT CATTTTAAGT CCTTCGGTGG ATCGATGTCG
ATTCCACTTG AAGAGGGCTT TACTGTTGTA ACAGGTCCAA ATGGTTCAGG TAAGAGCAAT
ATTCTTGATG GTGTTTTATT TTGTTTAGGG CTTGCAAATA GTCGAGGCAT GAGAGCAGAC
AGATTGCCTG ACTTAGTAAA TAGTGGCGTA TTAAAAGCTG GAAAATCTTC GGAAACTAAA
GTAACTGTCA AATTTGATTT AACTGATTGG AAGCCCGATG AAGCCGAAGA AGGTATAGAA
CCTACTGAGG AAGGGCCTTG GATTAAACCT GATCAAAAAG AATGGACAGT ATCAAGAAGA
TTAAAAGTTA TGCCAGGAGG GTCATATGCT TCCACTTACA GCGCAGATGG TGAGACTTGT
AATTTACAGC AATTACAAAC CCAATTAAGG CGACTAAGAA TCGATCCTGA GGGGAGCAAT
GTTGTTATGC AGGGAGATGT TACTCGAATT GTTTCTATGA GTAATAAAGA TCGTAGAGGT
CTAATAGACG AACTTGCTGG TGTTGCACTA TTTGATACAC GTATTGATCA AACTCGAGCA
AAGTTGGATG ATGTTTATGA AAGGCAGGAA CGTTGTCGGA TTGTTGAACA AGAACTGATT
CTTTCCAAAC AGCGTTTGCA AAAAGATTGT GAGAAAGCAA GTTTATATAA AGATCTAAAA
AATCAATTGT TAATTGGCAG ACAGCAAGAA TTAGTTTTAT CTTATGAAAA GGCAAAAAAG
GGACTGGAAA AACTAGATAT AGATCACCAA GAATTGCTTA AAAAAGAAAA AATAGATTCA
GAAAAGTTAC TTAATCATGA AAATGATTTA AGTACATGCA TAGAAAAATT AAATATCTTA
CAAAAAAATG TTAAAGAACT CGGTGAAGAT CAATTGCTTG AGGTTCAAGG TAAACTAGCA
GGGATTGAAT CTCAACATAG AGAGCTAGAA AGACAAGGAC TTAATCATAA AAATGAAGGT
GAGAAATTAC AGGAATCTAG AAATGATCTT CTACAGAAAA AGAAAGATTA TCAAACTGAC
TTGCAAAGTA AATTGAATGA GATTAATCCT GAAGAATTAG AAGAAGCTGA CTTAAGATGT
AAAGAGGCTG AGGCTTGGGT TGAATCTTCT AGACGGAAGC TTTCCGATGT AGCAGGTCGT
TCTGGTGCAT GGATAGAAAA ACATCAGAAA GCCAGAGATG AGCTTAATAA AATCCGATTG
GAATTAGATC CTAAAAGACT AGAGAAACAA AATATTGAAG AAAGTTTATT GCAATTAAAT
GTTATTTTAA AAGAATTAGA GACTGATCAA AAAGCTGATC AATCTTCCAA TGAAAAAGTA
CATATAGAAA TTAGTAATTT GAATGAAAAA TGGGATAGTA TTTTAGATTT ACTGTCTGTT
AAGAAAGAAG AATTTCAAGT ATTAGTATCT GAGAAGGGTA TACAAGAACG CACTAAATAT
AGATTAGAGA AAGAACAAGT CAAGCTTCAA AATGATATTG CTCGTTTAGA AAGTAGGAAA
GAAATGATAT CCGAAAGTCG AGGCACTAAT GCAATAACTT TGTTACTAGA GTCTGGTTTA
GAAGGTATAC ATGGTCCTGT AGCTAATTTA GGTGAAGTGG AAGATCGTTA CAGGATTGCT
CTTGAAGTAG CGGCTGGAGC CAGGCTTGGG CAGGTTGTTG TAGACAGCGA TCAAATTGCT
GCAAAATCAA TTGATCTTTT AAAACGAAAA AGAGCTGGAA GATTGACTTT TTTACCTCTT
AATAAGATTT TAAAAAACTC TCAAAGTAGG TCTGATGTAT TCCAGAGATC TGTTCACACT
AATCTCAATA AAAGTACTGG ATTAATTGGC AAAGCTATTG ATTTGATTCA ATATGATTCA
ATATATAAAA ATGTTTTTTT GTATGTATTT GGTGAAACAA TTGTTTTTAG TGACTTGTCA
TCAGCTCGTG ATCAAATTGG TATAAAAAGA GCTGTTACTT TAGAAGGTGA ATTACTGGAG
AAGAGTGGAG CGATGACTGG TGGAAGTTTA AATAACAGAG CCTTGGGTTT AAGTTTTGGA
AGAGTAAAAG ATAATGATGA TTGTGATCTT TTGAAGAATC GATTATTAGA AATTGGTGAG
ACTTTAACTA ATTGTCAAAA GAACGAAAAT CAACTCATAA ATAAGCTAGA CAATCTTAGA
TCTCAGCTAA GTAAATTAGA ACAAGAGAAA GCTGCACTTG ATGCTGAAAG AGTAACTTCT
AAAAGATCAA ATTCACCGTT ATTAGAACGC CAAAGCCATC GCTCAAAAAG AATTAGCGAT
CTTCAAAAAT CTAAAAAGGA AAAACTATGT CAATTAGAAT CTATTAATTT GATTATTAAA
CCTTTAGAGG TCATTTTACT AGAAATTGAG AAGGAAGAGA AAAAAATAGA TAAATCAAGT
GACTCATCTG TTTGGTCTAA ATTACAAAAT GATTTAGAAG ATGCTGATAA AAATCTTCTT
TCTTTTAGGA ATAAAAGAGA TGAGATTTCA AATAAGCAAT CTCAAACTAA GCTTGCAATT
GATCGATTAA ATGATCAAGA AACTACTTTA ATAAGCGAAG AAAAACGATT AAAAGATTCC
ATAGATACGC TTGCTTCTGC TCATATCGCT TGGCGTGAGC AAAGCAAACT ACTTACTACC
AATCGGCAAG ATTTGATAAA TCAACAAAAA GATTTAGAAA CTCGCTTTGG GGAACAACGA
AGAGAAAGAG ATTGTGTGGA AGCAGATGTA GCTAAAAAAA GATTCAATTT ACAAGAAATG
CAATGGAGTC TCCAACGTTT AAGGGAAGAT CAAAAAAACA TGAAGGAAGA GATACGAATG
GAAACTATTC GATGTACTGA ATTAGAGAGG AAGCTTCCTA ATCCTATGCC TTTGATTTCA
GATGAAATAA GAGATAATGG TTTGGATGAT TTACTTTCTA AATTGGAAGA TTTACAGAAA
AGAATGGAGG AATTGGAACC TGTCAATATG CTTGCATTGG AAGAGTTGGC TAAATTAGAA
GAGAGACTGA ATGAACTGGA AAATAGACTT CAGGTTCTAA CTGATGAAAG ATCGGAGTTA
TTACTTCGAA TAGAGACAGT TGCAACTTTA AGAGAGGAGG CCTTTATGGA GGCTTTTAAG
GCGGTTGATA TACATTTTCG TGAAATTTTT GCAAGCCTTT CTGAAGGAGA TGGACATTTG
CAGCTTGAAA ATCCTGAGGA ACCTTTGGAG GGTGGCTTGA CTTTGGTTGC TCATCCAAAA
GGTAAGCCTG TAAGACGGCT TGCGGCTATG TCAGGTGGAG AAAAATCTTT AACAGCTTTG
AGTTTTCTTT TTGCCTTGCA ACGTTTTAGA CCCTCTCCTT TTTATGCCCT TGATGAAGTA
GATAGTTTCT TGGATGGAGT AAATGTTGAA AGGTTAGCGG CCTTAATTGC TAAACAAGCT
GAACAGGCAC AATTTCTTGT CGTAAGTCAT AGAAGACCTA TGATTGGAGC ATCAATGAGG
ACTATTGGGG TTACACAAGC AAGGGGAAAT CATACTCAAG TTGTTGGGTT GCCAATCGCA
GCTTGA
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| Protein sequence | MVHINHVDLS HFKSFGGSMS IPLEEGFTVV TGPNGSGKSN ILDGVLFCLG LANSRGMRAD
RLPDLVNSGV LKAGKSSETK VTVKFDLTDW KPDEAEEGIE PTEEGPWIKP DQKEWTVSRR
LKVMPGGSYA STYSADGETC NLQQLQTQLR RLRIDPEGSN VVMQGDVTRI VSMSNKDRRG
LIDELAGVAL FDTRIDQTRA KLDDVYERQE RCRIVEQELI LSKQRLQKDC EKASLYKDLK
NQLLIGRQQE LVLSYEKAKK GLEKLDIDHQ ELLKKEKIDS EKLLNHENDL STCIEKLNIL
QKNVKELGED QLLEVQGKLA GIESQHRELE RQGLNHKNEG EKLQESRNDL LQKKKDYQTD
LQSKLNEINP EELEEADLRC KEAEAWVESS RRKLSDVAGR SGAWIEKHQK ARDELNKIRL
ELDPKRLEKQ NIEESLLQLN VILKELETDQ KADQSSNEKV HIEISNLNEK WDSILDLLSV
KKEEFQVLVS EKGIQERTKY RLEKEQVKLQ NDIARLESRK EMISESRGTN AITLLLESGL
EGIHGPVANL GEVEDRYRIA LEVAAGARLG QVVVDSDQIA AKSIDLLKRK RAGRLTFLPL
NKILKNSQSR SDVFQRSVHT NLNKSTGLIG KAIDLIQYDS IYKNVFLYVF GETIVFSDLS
SARDQIGIKR AVTLEGELLE KSGAMTGGSL NNRALGLSFG RVKDNDDCDL LKNRLLEIGE
TLTNCQKNEN QLINKLDNLR SQLSKLEQEK AALDAERVTS KRSNSPLLER QSHRSKRISD
LQKSKKEKLC QLESINLIIK PLEVILLEIE KEEKKIDKSS DSSVWSKLQN DLEDADKNLL
SFRNKRDEIS NKQSQTKLAI DRLNDQETTL ISEEKRLKDS IDTLASAHIA WREQSKLLTT
NRQDLINQQK DLETRFGEQR RERDCVEADV AKKRFNLQEM QWSLQRLRED QKNMKEEIRM
ETIRCTELER KLPNPMPLIS DEIRDNGLDD LLSKLEDLQK RMEELEPVNM LALEELAKLE
ERLNELENRL QVLTDERSEL LLRIETVATL REEAFMEAFK AVDIHFREIF ASLSEGDGHL
QLENPEEPLE GGLTLVAHPK GKPVRRLAAM SGGEKSLTAL SFLFALQRFR PSPFYALDEV
DSFLDGVNVE RLAALIAKQA EQAQFLVVSH RRPMIGASMR TIGVTQARGN HTQVVGLPIA
A
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