| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_00621 |
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| Symbol | gatB |
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| ID | 4779171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 68204 |
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| End bp | 69679 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640083325 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001013891 |
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| Protein GI | 124024775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.823049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAAT CAAATGTTTC TTGGGAAGTT GTAATTGGAT TAGAGACGCA TGTGCAGTTG
GGGACTAAGA GCAAAATATT TACTAGTGCA TCAACAACCT TTGGTGACGA TCCAAATACT
CATATTGACC CAGTGGTTTG CGGATTGCCA GGCACCTTGC CAGTCCTAAA TAAAAAGGTT
TTGGAATATG CAGTAAAAGC AGCGATGGCT TTGAATCTAA ATATTGCCTC TCACAGTAAA
TTTGATAGAA AGCAATATTT TTATCCCGAC TTACCAAAAA ATTATCAAAT CTCTCAGTTT
GATGAACCTA TTGCAGAAGA TGGTTGGATA GAAGTAGAAG TAGCTGAAAA AGGAAAAGAA
ACTTATGTCA AAAAAATAGG TATTGAGAGA CTACATATGG AGGAGGATGC AGGAAAACTG
GTGCACGCAG GTAGTGATCA ATTGTCAGGT TCTACTCATT CTTTGGTTGA TTACAACAGA
GCAGGCGTAG CACTTGCAGA AATAGTAAGC AAACCTGATT TAAGAACAGG TAGAGAGGCT
GCTGAGTATG CAGCTGAAGT TAGAAGAATC ATGCGTTATT TGGGAGTATC TGATGGGAAT
ATGCAGGAAG GTTCCTTGCG ATGTGATGTG AATATTTCAG TCAGACCAAC TATCAATGAC
CCATTTGGCA CAAAAGTAGA AATAAAAAAT ATGAATTCAT TTTCAGCTAT TCAGAAAGCT
TGTGAATATG AAATTAAGCG GCAAATTAAA GCTTATGAAT CTGGAGAAGA AGTAAAACAA
GAAACAAGGT TATGGGATGA AGGTAAGCAA CTGACTAAAA GTATGAGATC CAAAGAAGGC
AGTAGCGATT ATCGTTATTT TCCCGATCCT GATCTAGGTC CGATAGAAGT AAGTAATGAG
TTAAAAGAAA AATGGCGTTC AGAATTACCA GAATTGCCAG CTGCAAAAAG AAATAGATAT
TCAACAGAAC TTGGCCTTTC TATTTATGAT GCAAGAGTTT TGACTGATGA ATCTTCAATG
GCGACATATT TTGAAAAAGT TGTTAACGAA GGTGGAGCAG CTAAATCTTC AGCAAATTGG
ATAACTGGAG ATCTAGCAGC CTATATAAAC TCTAATAGAT TAACATTTGA TCAATTACAT
TTTCAGCCGA GTGAATTAGC AGAAATGTTA AAAATGATTG ATACTGGAGA AATAAGCGGC
AAAATTGCAA AGGAAATATT ACCTGAACTA TTAAGTAAAG GTGGTTCTCC AAAGCAATTA
GTTCAAGAAC GTGGTTTAGG TATGATTGGT GATCCTAAAG TTATTGAAGA AATTATCGAT
CAATTGATTC TTAAGCATCC AAATGAGGTT GAATCTTTTA GATCTGGGAA GAAGAAATTG
TTAGGGTTTT TTGTTGGTCA ATTAATGAAG GAAACAAAAG GGAAAGCAGA TCCAAAACTC
GCTAATCAAA TATTAAATAA AAAATTACAA GGTTAG
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| Protein sequence | MSESNVSWEV VIGLETHVQL GTKSKIFTSA STTFGDDPNT HIDPVVCGLP GTLPVLNKKV
LEYAVKAAMA LNLNIASHSK FDRKQYFYPD LPKNYQISQF DEPIAEDGWI EVEVAEKGKE
TYVKKIGIER LHMEEDAGKL VHAGSDQLSG STHSLVDYNR AGVALAEIVS KPDLRTGREA
AEYAAEVRRI MRYLGVSDGN MQEGSLRCDV NISVRPTIND PFGTKVEIKN MNSFSAIQKA
CEYEIKRQIK AYESGEEVKQ ETRLWDEGKQ LTKSMRSKEG SSDYRYFPDP DLGPIEVSNE
LKEKWRSELP ELPAAKRNRY STELGLSIYD ARVLTDESSM ATYFEKVVNE GGAAKSSANW
ITGDLAAYIN SNRLTFDQLH FQPSELAEML KMIDTGEISG KIAKEILPEL LSKGGSPKQL
VQERGLGMIG DPKVIEEIID QLILKHPNEV ESFRSGKKKL LGFFVGQLMK ETKGKADPKL
ANQILNKKLQ G
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