| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_00591 |
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| Symbol | speA |
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| ID | 4780988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 64424 |
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| End bp | 66367 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640083322 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001013888 |
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| Protein GI | 124024772 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0970534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGA AAAATACTAA TCAATCTCTT TCTTGGACTA TCCAAAATAG CTCAGAGCTC
TATGGGATTG ATCGATGGGG CAAGGGTTAT TTCACTATCA ATGAAAAAGG GAATATTAGT
ATTTGTCCTA ACGGTTCCAA AAACAAATCT CATGATTTGA TAGAACTATT AGATGAACTC
GAAAGTCGAA AACTAAAATT TCCTCTGTTA ATAAGATTTG ACGATATTCT AGAAGACTGC
TTAAAAAACT TACATAAAGC TTTTGAAAAA GCGATTAATG ACTATCAATA TGAAGGAAAA
TACCAAGGTG TATTTCCAAT AAAATGTAAT CAACAGCGTC ACGTAGTTGA AGAATTAATC
ACCTGTGGTT CCAAATGGAA TTTTGGCTTA GAAGCTGGAA GCAAACCAGA GTTACTAATT
GGTTTATCAA TCCTAGAAAA TCCTAAAGCC TTACTCATAT GTAATGGCTA TAAAGATCAA
CGTTATATTG AAACAGCTAT TTTAGCACGT CAGCTTGGAC GTCAACCTAT AGTAGTTATA
GAACAAGCAA ATGATGTTGA GCTTATAATC AAATCTAGTG ATTTACTTGG AGCGTCTCCA
CTCATAGGAA TACGAGCCAA GCTATCGAGT CAAAGCAGTG GAAGATGGAG TAGCTCGATT
GGTGACAAGT CAAAATTTGG ACTTTCAATT CCAGAAATTT TAAAAACAAT CAAAAGGTTA
AAAGAAGCAA ATCTTCTCAA TGAATTAAAG CTTTTACATT TTCATCTAGG GAGTCAAATT
AACGATATAG GTGTTTTAAA AGATGCCTTA CAAGAAGCAG GACAAATTTA TGCCGAATTA
ATTAATCTTG GGGCACCTAT GGGATACTTA GATGTTGGAG GTGGCTTAGG AATTGATTAC
GATGGAAGTC AAACCGCCTC AATAGCATCT ACTAACTATT CACTTCAAAA TTATGCAAAT
GATGTAGTAG CAACAATTAA AGAATGTTGT GAATCAAAAA AGATACCACT ACCCACTTTA
ATTACAGAGA GTGGAAGAGC TATTGCTAGT CACTTTTCGA TTTTAATCTT CAATATTCTA
GGTAAAAATT CGTTACCTTC TGACATTCCT AAAGAAAGCG AAAAAGAATG TCTCTCTGTC
AGAAATTTAC GTGACACATT AGTCCATATA AATTCTCTAG AACTTAAGCA AGAAGAAGAT
TTAGCCAAAC TACAAGAAGC ATGGAATGAT TCTCTTAAAT TCAAAGCAGA TGCACTTGCG
GCTTTTCGAC TCGGTTATAT AGATTTAGTT GAACGAGCAA AAGCTGAGCA GTTGACATGG
GCCTGTGCAA AAACAATAGT TAATCAGTTA CCAAAAAACA TACTTCTACC TAAAGAACTA
AAGAAATTAA GTGAAAGCTT AGCCGTTACG TATTACGCAA ATCTTTCCGT ATTTAGATCA
GCTCCAGACA CATGGGCCAT TGATCAAGTC TTTCCAATTA TGCCAATCCA TCGGCTTCGC
AAAGAACCGA AAAAACTTGG TCACTTTGCA GATTTAACAT GTGATTCAGA TGGAAAGCTT
GATCAATTTA TTGATAATGG AAAAATTAAA AATTTGCTCC CTCTTCATGA ATTTAATCAA
GACGAAAAAT ATCTAATTGG TCTTTTCTTG GGTGGCGCCT ATCAAGAAGT AATGGGAAAT
CTACATAATT TATTTGGAAG TACTAATGCA GTCCATATAA GATTTACAGA AAATGGGAAC
TATAAAGTTG AGCATGTCAT TCGTGGAAAT ACAAAATCAA ATGTTCTTGA ATATTTAGAA
CATGATCCAG AAATATTATT AGAACGATTA CGAAAATCAA GCGAATTAGC TATTCAAGGC
GGGCATCTAA AAATCCATGA TGCACAAAAA CTAATAGAGC ATGTAGAAGC AAGCCTCCGT
CAAAGTACTT ACCTACAGAG CTAA
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| Protein sequence | MAVKNTNQSL SWTIQNSSEL YGIDRWGKGY FTINEKGNIS ICPNGSKNKS HDLIELLDEL
ESRKLKFPLL IRFDDILEDC LKNLHKAFEK AINDYQYEGK YQGVFPIKCN QQRHVVEELI
TCGSKWNFGL EAGSKPELLI GLSILENPKA LLICNGYKDQ RYIETAILAR QLGRQPIVVI
EQANDVELII KSSDLLGASP LIGIRAKLSS QSSGRWSSSI GDKSKFGLSI PEILKTIKRL
KEANLLNELK LLHFHLGSQI NDIGVLKDAL QEAGQIYAEL INLGAPMGYL DVGGGLGIDY
DGSQTASIAS TNYSLQNYAN DVVATIKECC ESKKIPLPTL ITESGRAIAS HFSILIFNIL
GKNSLPSDIP KESEKECLSV RNLRDTLVHI NSLELKQEED LAKLQEAWND SLKFKADALA
AFRLGYIDLV ERAKAEQLTW ACAKTIVNQL PKNILLPKEL KKLSESLAVT YYANLSVFRS
APDTWAIDQV FPIMPIHRLR KEPKKLGHFA DLTCDSDGKL DQFIDNGKIK NLLPLHEFNQ
DEKYLIGLFL GGAYQEVMGN LHNLFGSTNA VHIRFTENGN YKVEHVIRGN TKSNVLEYLE
HDPEILLERL RKSSELAIQG GHLKIHDAQK LIEHVEASLR QSTYLQS
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