Gene NATL1_00541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00541 
Symbol 
ID4780203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp55423 
End bp57252 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content36% 
IMG OID640083317 
Productputative penicillin-binding protein 
Protein accessionYP_001013883 
Protein GI124024767 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA AAGAAAAATT ACATCTAAGT TCTAAAAAGC ACGTAGGTGC TTTTAATCAG 
CCTCTAATTT TCTTTTTGTT TATTTGTTTA ATCTTTTCAG TGACAGTTGG GCGTCTTTTT
TGGATACAAA TAATTAGGGG GTCATATTAT AAAAAACTTT CAGTGGAAAA TAGAGTCAAG
CTAATTGCTA ATCCACCAAT ACGAGGAAGA TTATTAGATC GTAATGGTGT AGTTCTTGCC
GATAATAAAC TCTTTTACTC ATTAGCTATT CAACCTAGAC TTCTAACTAA AAGTGAATGG
ATTGATCTAA GAAACTCTTT ATCTGATTTG TTAAATGTTT CTACTGATCA ATTAGACATT
GCATTTAATA GAAGTAATTC TGACACTCCT TATAAAAAAG TACTATTAAC TGATTTATCG
GTGGAGCAGG TTATTAGGTT TAAAGAACAA GAGAATAATT TGTATGGTGC TCAAATTGAT
ATTGGTTTAA TTAGAAACTA TCCATATAAG TCTTTAGCTG CACATACTTT GGGTTATACA
CAGTTGATAA CTCAGAACGA GTTTTCTAAG CTTTCAGAAA GAGGTTATAA ACTATCTGAT
CGAATTGGAC GGAAAGGTAT AGAGGCTGCT TTTGAATCTC AATTGAGAGG TGCATGGGGA
GGTGAAATGC TTGAGATTGA TTCAATAGGT ACGGTTCAAC GCAGCCTAGG TTTAAAGTTG
CCAAAAGCTG GTAGGGATAT CAAATTAACT CTTGATCTAG AGCTACAACT TACTGCAGAA
AAAGTTTTAT CTGACAAAAT TGCTGGAGCA ATAGTAGCTA TTGATCCCTA CACAGGAGCA
ATAAGAGCAA TTGCTAGTCA ACCTACTTTC GACCTTAATT TTTTTTCTCA GCCTTTTACG
AATAAACAAT ATAACGATCT TTTTTTGTCA TCAAATCTTC CTCTTTTGAG TAGAGCATTT
AATGCATATG ATCCAGGAAG TACGTGGAAG CCCATAACTG CTATAGCAGG GATGGAAAGT
GGTAAATTTC CTGCTAGTAA AAAATTAAAT ACGGTTCCTT GTATCACTTA TGGGAGTCAT
TGTTTTCCAG AATATAATAA AAGAGGTTTT GGTTGGATTG GATATGAAGA TGCATTTAGA
GTTTCCAGTA ATACTTTTTT TTATCAGGTT GGGGTTGGTT CTGGTTCGAA GGCTTTATAT
GATGCGGCAA CTAAACTTGG CTTTGATAAT TATACTGGCA TAGAAACTTT TATAGATGAA
AATAAAGGCT TAGTAGGGAA CAAGAAATGG GCTGCCGAGG GTCGTGGCTG GGGGAATCCT
GGAGAAACTC CTTGGATCGT AGAGGATATG GCTAGTGCAT CTATTGGTCA ATCTGTTGTT
TTAGTTACTC CATTGCAATT AGCACGAGCA TATGCGGTTT TTGCAAATGG TGGCTATTTG
ATTACTCCTC ATTTAGTTGA TGCCAATATA AACTGGAGAT CAGAGAAATA TTTAAAAAAA
GTTGACATAG AAGACAAAAC ACTTGAAACA ATTCGTCGTG GGCTTCGTAA AGTTGTAACT
AGTGGTACTG GTATTGGAAT AAATCTAGAT AATTCTATTC TCCCTCCAGT CGCTGGTAAA
ACTGGAACAG CAGAAGATAG TAGTGGAGGT GCTGATCATG CATGGTTTGC TGGATTTGCA
CCTTATGACT CTGGGAAAAT AGTTATTGTT GCTTTTGCTC AGAATACTCC TGGTGGTGGT
TCAGTACATG CTCTACCTAT GGCAAGAAAA GTGCTACGGG CTTGGTATGA GCAAAAATCT
AAAAATGAGT TAATTAGAAG TAAAGATTAG
 
Protein sequence
MKKKEKLHLS SKKHVGAFNQ PLIFFLFICL IFSVTVGRLF WIQIIRGSYY KKLSVENRVK 
LIANPPIRGR LLDRNGVVLA DNKLFYSLAI QPRLLTKSEW IDLRNSLSDL LNVSTDQLDI
AFNRSNSDTP YKKVLLTDLS VEQVIRFKEQ ENNLYGAQID IGLIRNYPYK SLAAHTLGYT
QLITQNEFSK LSERGYKLSD RIGRKGIEAA FESQLRGAWG GEMLEIDSIG TVQRSLGLKL
PKAGRDIKLT LDLELQLTAE KVLSDKIAGA IVAIDPYTGA IRAIASQPTF DLNFFSQPFT
NKQYNDLFLS SNLPLLSRAF NAYDPGSTWK PITAIAGMES GKFPASKKLN TVPCITYGSH
CFPEYNKRGF GWIGYEDAFR VSSNTFFYQV GVGSGSKALY DAATKLGFDN YTGIETFIDE
NKGLVGNKKW AAEGRGWGNP GETPWIVEDM ASASIGQSVV LVTPLQLARA YAVFANGGYL
ITPHLVDANI NWRSEKYLKK VDIEDKTLET IRRGLRKVVT SGTGIGINLD NSILPPVAGK
TGTAEDSSGG ADHAWFAGFA PYDSGKIVIV AFAQNTPGGG SVHALPMARK VLRAWYEQKS
KNELIRSKD