Gene NATL1_00441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00441 
Symbol 
ID4779679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp46962 
End bp48923 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content27% 
IMG OID640083307 
Producthypothetical protein 
Protein accessionYP_001013873 
Protein GI124024757 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTC CTAGTCAAAA AGGAGCAGGA AAGAAGAAAA TCAATGAAGT CAAAACATTC 
CCAGTTCCAT TTCCTTTAGA AAAAAATCAA GGAAACCTTA CTATTAATTC AAAATCTCCT
TCTAAACCTT CTAAAGAGCA AATTATTAGT CAAGCAATTA GATTTCATGA ACAAGGTAAA
ATTATAGAGG CGACAAAATA TTACCAATAT TGTCTTAATC ACGATTTTAA TGATCCGATA
GTTTTTTTAA ATTATGGAAC AATATTAAGA TCAATCGGCA AATTAAAAAA AGCAGAAATA
TTTATACGCA AAGCAATAAA TATTGACCCT AATCTTCAAG ATGTTCATTT TAAGCTTGGA
GTAGTTTTAA ACGAACTTAA TAGACCAAAA GAAGCTATAA AATATTTTTT ATATGAATCT
TATACTTCTT TAGATAATAC AAAAAAAAGT TTCTATATTT CAAACTTTTT ATCAGAAAAT
TACCAAACTA TTTTTGATAA AGAAGATATC AAATACCTCT TAAATATTCT GATAAAAAAA
GATAATATCT CCCACGATAT TTTATTTAAT ATATTTAATC AATTGTATGA TTTAGAAAAA
ATATTAGACG ATAAAGAAAA AAAATTACTT TTACATGATC AACTTATCTC TAAAAGTCTT
GAGCGGATGA TATTTACGAG TCAAAGATGG GAAAACTTTT TAAGAAAAAT TAGAGAAGAA
ATATGCTCGA TACTAGCTAA TGGTAGCAGA GTTTTAATAA ATAGTGAAAG CAATTTTCTA
ATAAGCCTTG CTCATCAGTG CTTTATAAAT GAGTATGTCT ATTATTGTAC AAATAAAGAA
TTAAATTATA TAAAAATTAT AATTAATAAA ATGAATAAAG GTGAAAAAAA TAAAGATTTA
ATCTTTGTAC TAGCTTGCTA TTATCCTTTA TATAAACTAA TCGAATTGAT CCCTTGTATC
AAATCATTTA AGTCAACAGA GATAAAAATT AATAACCTTT TAAAATTACA GATTGGAGAT
CGAAAACAAG AAATAGAATT ATCAAAAAGA CTAAAGAAAT TAGGAAACAT AAATGATGAA
ATCTCGAAAA AAGTTATGAC TCAATATGAA AATAGACCTT TCCCTTCTTG GCGTAATATT
TTTGATATTG ATAAGCTAAA AAAGTACGCT GACCAAAAAA TCAATGATGA GATCAATCCT
AATATTATTA GTCCTAACTT TAAATCAAAA AAGTTAAAGG TATTAATAGC TGGATGCGGA
ACAGGGCAAC AGGTATTACT TGCGAAAGAA TATAAAAATT CTGAAATAAC AGGAATAGAA
TTAAGCTCTT CTAGCCTTTC CTATGCTCAA AGAAAATTCA ATGAACTTGG CATTAATAAT
ATTAAATTAA TACAGATGGA TATTCTAGAA CTCTCATTAT TAAAAGAAAA GTTTGATCTA
ATCGAGTCTA TAGGTGTTTT ACACCATATG AAATCTCCAG AAGAAGGGCT CAAAGCCTTA
TTAGAAGTGT TAAAAATAAA TGGTTTTTTG AAGTTAGGTT TGTATAGCAA AAAAGCTAGG
GGAACGATTC AAGCAGCTAG AGATTATATA GAGTCAAGAA ATATTGAAGT TAATGAGAAA
AATATAAGAA AATTTAGAAT GTCAATTTTC AATGGTGATC TTCCAGAATT TAAATCATTC
ATACAAGAAC CACTATTCTA TACAGTTAGT GGTGTAGAGG ATTTATGTTT TCATACTCAA
GAGTGGCAAT TTAATCTTTT TGAGATTCAA CAAATGATCG AAACAAATAA ACTGGATTTC
AAAGGATTCC TACTTCCACA ATCAATTAAA TCTCTCTATG CGAAATATTT CCCAGAAGAT
AAAACGCAAA CAAACTTACA AAACTGGGCA AGGTTTGAAG AGAAACATCC GTCAACTTTC
GCAGGTATGT ATAATTTTTG GGTTTCGAAA ACGAAAATTT AA
 
Protein sequence
MDSPSQKGAG KKKINEVKTF PVPFPLEKNQ GNLTINSKSP SKPSKEQIIS QAIRFHEQGK 
IIEATKYYQY CLNHDFNDPI VFLNYGTILR SIGKLKKAEI FIRKAINIDP NLQDVHFKLG
VVLNELNRPK EAIKYFLYES YTSLDNTKKS FYISNFLSEN YQTIFDKEDI KYLLNILIKK
DNISHDILFN IFNQLYDLEK ILDDKEKKLL LHDQLISKSL ERMIFTSQRW ENFLRKIREE
ICSILANGSR VLINSESNFL ISLAHQCFIN EYVYYCTNKE LNYIKIIINK MNKGEKNKDL
IFVLACYYPL YKLIELIPCI KSFKSTEIKI NNLLKLQIGD RKQEIELSKR LKKLGNINDE
ISKKVMTQYE NRPFPSWRNI FDIDKLKKYA DQKINDEINP NIISPNFKSK KLKVLIAGCG
TGQQVLLAKE YKNSEITGIE LSSSSLSYAQ RKFNELGINN IKLIQMDILE LSLLKEKFDL
IESIGVLHHM KSPEEGLKAL LEVLKINGFL KLGLYSKKAR GTIQAARDYI ESRNIEVNEK
NIRKFRMSIF NGDLPEFKSF IQEPLFYTVS GVEDLCFHTQ EWQFNLFEIQ QMIETNKLDF
KGFLLPQSIK SLYAKYFPED KTQTNLQNWA RFEEKHPSTF AGMYNFWVSK TKI