Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_00281 |
Symbol | |
ID | 4780729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 30180 |
End bp | 31076 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640083291 |
Product | nucleoside-diphosphate-sugar epimerases |
Protein accession | YP_001013857 |
Protein GI | 124024741 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAG AGATTGTCAA GCGATCTAAG CCTCTACCGC CTAAATCAAA ATTAATCATA TTTGGAGGTG GCTTTAGTGG ACAAAGAATT GCAAGTGTAG GAAGGCATTT AGGAGTAAAA GTTTTATGCA GCAGGAGAAG AGAGGGTAGC AAAGGAGCTA ATTTTATATT TAATACTGAT CAAGAATTCA CTAATGAAGT TTTGGAGGGA GCAACACATG TCTTAAGTTG CATACCTCCT TTGTTAAGTG GAGAAGATCC TGTACTTCTT AAACTTAAAA CTCAATTACT AAATGCAAAA AAAATAAAAT GGGTGGGTTA TTTATCTACT ACTGGTGTAT ACGGAGATTC AAAAGGGAAC TGGGTCAATG AAAATACGCC TCCCAACCCT CTGCAAGAGA GAAGTATTCG TAGATTGTCT TGTGAAAAAC AATGGTTAGA CACAAAGCTT CCCATTCAAA TTCTTAGATT GCCAGGAATT TATGGACCTG GAAGATCTGT GTTTGAAAGC CTTTTAAATG GAACAACAAA AATGATCGAT AAACCAGGTC AAGTTTTTTC AAGAATTCAT GTCGATGATA TTGCTGGATC TGTCTTATTC CTAATTAATC TCTATTTTCA AGGGAAAACT CCATCCATAG TGAATGTAGC TGATAACCTG CCAGCCAATA ATCTTGACGT GATTAATTTT GCAGCGAACA TAGCCAAAAA GTCTCTACCA TCAAAAGTGC CTTTTGAAAT AGCACAAAAA ACAATGAGTC CAATGGCAAA ATCTTTTTGG CAAGAAAATA GAAAAGTTGA TAACAAGTTA TTATGTAAAA AACTTGGCTA TTCTCTAATT TATCCAGATT TTAAATCTGG ATTAAAAAAT TGTTACTTCC AACAAAAAAT AAATTAA
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Protein sequence | MIQEIVKRSK PLPPKSKLII FGGGFSGQRI ASVGRHLGVK VLCSRRREGS KGANFIFNTD QEFTNEVLEG ATHVLSCIPP LLSGEDPVLL KLKTQLLNAK KIKWVGYLST TGVYGDSKGN WVNENTPPNP LQERSIRRLS CEKQWLDTKL PIQILRLPGI YGPGRSVFES LLNGTTKMID KPGQVFSRIH VDDIAGSVLF LINLYFQGKT PSIVNVADNL PANNLDVINF AANIAKKSLP SKVPFEIAQK TMSPMAKSFW QENRKVDNKL LCKKLGYSLI YPDFKSGLKN CYFQQKIN
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