Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_00251 |
Symbol | efp |
ID | 4780891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 27900 |
End bp | 28463 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640083288 |
Product | elongation factor P |
Protein accession | YP_001013854 |
Protein GI | 124024738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAA GTAACGACTT TCGCACTGGC ACTACGATCG AGTTAGACGG TGCAGTTTGG CGTGTTATTG AATTTCTACA TGTCAAGCCT GGAAAGGGTT CTGCGTTTGT TAGGACCAAA TTAAAGGCTG TTGTGAGCGG TAGTGTTGTC GAAAAAACTT TTAGAGCTGG AGAAATGGTT CCACAAGCTC TTTTGGAGAA ATCAAAGTTG CAACACACAT ATATGGACGG AGATGAGTTT GTGTTTATGG ATATGACTTC TTATGAAGAA ACGCGTCTCA CAGCTAAACA AATTGGTGAA AGCAGGAAAT ATTTAAAGGA AGGGATGGAG GTTAATGTAG TGTCTTGGAA TGAAAAACCT CTTGAAGTGG AATTGCCCAA CTCAGTTGTT TTAGAAATAA AAGAAACTGA TCCTGGCGTC AAAGGTGACA CTGCTTCTGG AGGAACAAAG CCTGCAATTT TGGAAACAGG AGCCCAAGTC ATGGTCCCAT TATTTATTTC AATTGGTGAG AAAATTCGAG TAGATACTCG AAATGACAGT TATCTAGGCC GAGAGACACA ATGA
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Protein sequence | MISSNDFRTG TTIELDGAVW RVIEFLHVKP GKGSAFVRTK LKAVVSGSVV EKTFRAGEMV PQALLEKSKL QHTYMDGDEF VFMDMTSYEE TRLTAKQIGE SRKYLKEGME VNVVSWNEKP LEVELPNSVV LEIKETDPGV KGDTASGGTK PAILETGAQV MVPLFISIGE KIRVDTRNDS YLGRETQ
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