Gene NATL1_00251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00251 
Symbolefp 
ID4780891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp27900 
End bp28463 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content41% 
IMG OID640083288 
Productelongation factor P 
Protein accessionYP_001013854 
Protein GI124024738 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA GTAACGACTT TCGCACTGGC ACTACGATCG AGTTAGACGG TGCAGTTTGG 
CGTGTTATTG AATTTCTACA TGTCAAGCCT GGAAAGGGTT CTGCGTTTGT TAGGACCAAA
TTAAAGGCTG TTGTGAGCGG TAGTGTTGTC GAAAAAACTT TTAGAGCTGG AGAAATGGTT
CCACAAGCTC TTTTGGAGAA ATCAAAGTTG CAACACACAT ATATGGACGG AGATGAGTTT
GTGTTTATGG ATATGACTTC TTATGAAGAA ACGCGTCTCA CAGCTAAACA AATTGGTGAA
AGCAGGAAAT ATTTAAAGGA AGGGATGGAG GTTAATGTAG TGTCTTGGAA TGAAAAACCT
CTTGAAGTGG AATTGCCCAA CTCAGTTGTT TTAGAAATAA AAGAAACTGA TCCTGGCGTC
AAAGGTGACA CTGCTTCTGG AGGAACAAAG CCTGCAATTT TGGAAACAGG AGCCCAAGTC
ATGGTCCCAT TATTTATTTC AATTGGTGAG AAAATTCGAG TAGATACTCG AAATGACAGT
TATCTAGGCC GAGAGACACA ATGA
 
Protein sequence
MISSNDFRTG TTIELDGAVW RVIEFLHVKP GKGSAFVRTK LKAVVSGSVV EKTFRAGEMV 
PQALLEKSKL QHTYMDGDEF VFMDMTSYEE TRLTAKQIGE SRKYLKEGME VNVVSWNEKP
LEVELPNSVV LEIKETDPGV KGDTASGGTK PAILETGAQV MVPLFISIGE KIRVDTRNDS
YLGRETQ