Gene NATL1_00181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00181 
Symbol 
ID4780881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp20921 
End bp21859 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content32% 
IMG OID640083281 
ProductGTPases 
Protein accessionYP_001013847 
Protein GI124024731 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.712591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.906931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAA ATAAATCTAA TAAATTAAAA GGTATTGTTG TTGCACTTAA GGCAAATTTT 
TTAATCGTAG AGATTGATCA TAAAAATTTT AAAGATTATT CATTTGATGA ATTTAACGGG
AAAATTAGAC TTTTATGTAT ACGAAGAAGT AAATTAAATT ATCAAGGTTT ATTTATAGAT
GTAGGTGACA TAGTTGGCGT CGAGTCTATA GATTATAAAA ACAAACGAGC TGTAGTTTCT
GATGTAGAGC CTAGACAAAG TTTCTTAAAG CGTCCAGCAG TGGCAAATGT TACATTAGTT
TCTATTTGTA TCTCAGCTGA TGAGCCTTTA TTTGATATGG AGCAAACAAG CCGTTTTTTA
TTAACAGCTG AATGTGCAAA TATAGAGCCA TTAATAATTT TAACTAAAAT AGATTTAATT
ACAAAGAATG ATTTGATTTT ATATATAAAT AAATTTAAAT CTTGGGGGTA TGATTGTATA
CCAGTATCTA TACATAATTC TCAGGGTATT GATTCATTAA TAGAACGATT GCGAAAAACA
AAATTAACTG TACTTGCTGG TCCTTCTGGA GTAGGAAAGA CAAGTTTAAT TAATCATTTA
ATCCCAACAG TTTCACTACC TACTTCATCT GTTTCAAAAA AATTAAAGAG AGGTACACAC
ACGACTAGGC ATGTGGAACT TTTTGCTATT GGAAATGGAT CACTTCTTGC TGATACACCG
GGGTTTAATC GTCCGGAAAT AGTATGTGAG CCATCTGATT TTGCTTTTTT GTTCCCAGAG
TTTCGAACTC AGTTAAGCAA TTCACAATGC AAGTTCCGAA ATTGTTTGCA TAGAGATGAA
CCTGGTTGTG TAATTGATAA AGATCTTGAA AGATATCCTT TTTATCGTGA GAACCTTGAA
GAAATGATTA ACTCTCCTCT CCCATACCAG GCAGGTTAA
 
Protein sequence
MNKNKSNKLK GIVVALKANF LIVEIDHKNF KDYSFDEFNG KIRLLCIRRS KLNYQGLFID 
VGDIVGVESI DYKNKRAVVS DVEPRQSFLK RPAVANVTLV SICISADEPL FDMEQTSRFL
LTAECANIEP LIILTKIDLI TKNDLILYIN KFKSWGYDCI PVSIHNSQGI DSLIERLRKT
KLTVLAGPSG VGKTSLINHL IPTVSLPTSS VSKKLKRGTH TTRHVELFAI GNGSLLADTP
GFNRPEIVCE PSDFAFLFPE FRTQLSNSQC KFRNCLHRDE PGCVIDKDLE RYPFYRENLE
EMINSPLPYQ AG