| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_00101 |
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| Symbol | rsbU |
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| ID | 4779737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 13337 |
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| End bp | 14734 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640083273 |
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| Product | protein phosphatase 2C domain-containing protein |
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| Protein accession | YP_001013839 |
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| Protein GI | 124024723 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAAA ATTCTCCAAT TTCAGAACAA CAAAATCAAC ATCCTACCAA CCTCTGCTCA
AGTGCTGCTT CCAAGTCTCT AAGCGATTTG GTTCATAGCC TTTCTCAAGA GCAAGTTGTT
AATCAAGATT TATTGCTTTC ATTGAGCTTT GCTTTGCGAA GTTTTACTAA TTTACAGCGT
TTTCTTGAAC TTATTCCACT GCTTGTCACT CAATTAGTTG GCGTTAAAGG ATCATTGTTA
ATTCCATTTC AAGATAATGG AAGCCTTTGG CGGGAACAGT TACAAATGGT CCCTATAGAT
GAAGATCAGG AACTCTTTAG AAAATTATTT CTTTTAGAGA AAGGGAAGAA AACGGGTTTT
GGCATGGAGG AAAAGAATAT TGAAATGTTA GATGGTTTAG TTCAAAGACA TCTTGATTCT
TCCAATGTAA TTGCTACATC GATAGTTTCT CGAGGAAGAC AGCGAGGTCG ATTATATGCG
TTTGATAAAA AAGAGATTGT TTTTGGTAGT AATGTTCATC GCAAACATAT TCAAATAGTT
GCTGATCTTG CTGGAGTAGC TATAGAAAAT GATGCAATTT TTCAGGTGAT TCGTAATCAT
GAAAAAGTTG ATAGACAAAT AAGTATTGGT GCTGAAATCC AATCACAATT ATTACCTGAT
CAATGTCCAG TAATTGAAGG AGTTGAATTG GCTGCTTGCT GTAGGCCAGC TTTTCAAGTA
GGTGGCGATT ATTACGATTT TATGCCCACT CGCTCAGATT TAAATGAAAC AGCAAAAGCT
AGTGGGCGTT GGGCTTTTGT GATTGGTGAT GTTATGGGTA AAGGTGTTCC TGCTGGATTG
TTGATGACTA TGTTAAGAGG AATGCTTAGA GCGGAAGTTT TAACAGGACT ACCCCCTGAT
TCTATTTTGC ATGACCTGAA TCAATTAGCT CTTGAAGATC TGACTCAATC ACATAGGTTT
GTAACTTTGT TTTATTCTGA CTTTGATGCT AAATCAAGAA AATTACGTTT TGCTAATGCA
GCACATAACC CTCCTTTGCT TTGGAGCTCC AAGACAAAAT CAATTAATAG ATTAGATACC
CCTGGTTTGT TAATAGGTCT TCAACCTGAA GCTGAATATG GATGTGGTGA GATATTTCTG
CAGCCTGGCG ATGTCCTTCT TTACTACACC GATGGAGTTA CTGAGGCACC CGGGATATCA
GGTGAACGTT TTGATGAAAA TCGTTTAATA ACTTTTTTAG ATAAATTTGC TAAGGAAGGT
TTGGGAGCCA AACAAATATT AAATAAACTT TTTGAAAGAT TAGATGGTTT TGTTGGTGTT
AGTGATCATC ATCTTGAAGA TGATGCATCA ATGGTGGTTT TAAAAGTCAA AGAATCAACG
GTTCCTGAAT TAAATTAG
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| Protein sequence | MKENSPISEQ QNQHPTNLCS SAASKSLSDL VHSLSQEQVV NQDLLLSLSF ALRSFTNLQR
FLELIPLLVT QLVGVKGSLL IPFQDNGSLW REQLQMVPID EDQELFRKLF LLEKGKKTGF
GMEEKNIEML DGLVQRHLDS SNVIATSIVS RGRQRGRLYA FDKKEIVFGS NVHRKHIQIV
ADLAGVAIEN DAIFQVIRNH EKVDRQISIG AEIQSQLLPD QCPVIEGVEL AACCRPAFQV
GGDYYDFMPT RSDLNETAKA SGRWAFVIGD VMGKGVPAGL LMTMLRGMLR AEVLTGLPPD
SILHDLNQLA LEDLTQSHRF VTLFYSDFDA KSRKLRFANA AHNPPLLWSS KTKSINRLDT
PGLLIGLQPE AEYGCGEIFL QPGDVLLYYT DGVTEAPGIS GERFDENRLI TFLDKFAKEG
LGAKQILNKL FERLDGFVGV SDHHLEDDAS MVVLKVKEST VPELN
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