Gene P9515_18971 details

Gene Information

• Locus tag: P9515_18971
• Symbol: rpsF
• ID: 4720130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 1690646
• End bp: 1691113
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640081598
• Product: 30S ribosomal protein S6
• Protein accession: YP_001012211
• Protein GI: 123967130
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATC AAATTTATTA CGAAACTATG TATATTCTTC GCCCGGATAT CGCGGAGGAG 
GAAGTGAAAA ATCATATCGA TAAATATAAT AAACTTCTTG AAGAATTTGG TGCGACAATC 
CTCGATAGTC AAATGAGAGG TAAAAGAAGG CTTGCTTATC AGATAGCAAA ACATCGGGAG 
GGGATTTATG TGCAATTAAG TCATCAAGGG GACGGACAAC ATATCTTCAA AATAGAAAAA 
GCAATGCGTT TAAGTGAAGA TGTCATAAGA TATTTGACAG TAAAGCAAGA AGGTCCTTTA 
CCGACACCAA GATCTTCTAA TAAAAGCTCT AATCAAGCAG AAAAAAAAGA AAATGAGAAT 
ATTGATTCAG CCAATAAATC TGAGCCTAAA GCAGACGAAA CGGATAATAA AAAGAAAATA 
ACCTTAGAAT CTTCTACTCC AGAATTAGAA GAGCAAGTAA AATCTTAA 

 

Protein sequence

MTDQIYYETM YILRPDIAEE EVKNHIDKYN KLLEEFGATI LDSQMRGKRR LAYQIAKHRE 
GIYVQLSHQG DGQHIFKIEK AMRLSEDVIR YLTVKQEGPL PTPRSSNKSS NQAEKKENEN 
IDSANKSEPK ADETDNKKKI TLESSTPELE EQVKS