Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_18861 |
Symbol | |
ID | 4720536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1675343 |
End bp | 1676593 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640081587 |
Product | major facilitator superfamily multidrug-efflux transporter |
Protein accession | YP_001012200 |
Protein GI | 123967119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.779737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAAAA GTTTATTTAA GCCAAGTAGG AAATTCACAT TATTCAGTGC TTTTATAACT CTCTTAAATG ATCGTTTAAG TGAAAGTATT CTTTTGCCTA TTTTACCTTC TTTTGTTTTA CTTTTTGATT CAAAAGCAAG TACTTACGGT TTACTATCCT GTACTTATCA ATTAGCACAA TTTACAGCTT CACCATTTAT TGGGCTTATG AGTGACAGAT ATGGTAGAAG ACCTGTAACA CTATTTTGTA TAACTGGCTC AATAATCGGA ATCTCAATAC TATCATTTAC AGTTTTATTT GATTGGTCAA ATTCAATAGC TACTATTCCC TTATTTTTAT TATTTATAGC AAGACTTATA GACGGGCTCA GTGGTGGGAC TGCAGCAACA GCGACTACCA TCCTTGCAGA TATTTCTAGC CCTGAAAAAA GAGCCAAAAC ATTTGGACTT ATTGGGGTTG CCTTTGGATT AAGTTTTTTC TTAGGAAATA TATTTGTTGT AATTTTTGCT AAAAATACAA ATAATAATTT CATTATTCCC GTAATAATAG CTTCAATTAT TCCAATTATT AACTTTATAC TAGTCCTTTT TTATTTACCA GAAACTAAAC CTCAAAACGA ATTAAACAAA TCACCCCAAA TGTTGAAAAA TCCTTTAAAA AAATTATTTA AAGTATTTAA AGAAGATAAA ATCAGAAAAC TATCTCTAGC TTTTTTTATA TATTTCATAG CTTTTACTGG ACTAACGAAC ATTTTAATAT TCTTCCTTCA AGAGTCTCTT AATTGGACAA CTAAGGCATC AAGTGGAACT CTTGTCGTCG TAGGCGTGAT AGCAATAATT GTACAGGGTG GACTAATTGG TCCCTTAGTA AAAAGATTTG GCGAAATGAA ACTCACCTTA ATTGGTTCAG GTTTTATTCT TCTAGCATGT ATCCTTTTGA TAACTACCCC TAAAGAAAAT GCGGCAATAA ATATTTATTC TGCAGTATCA TTTTTAGCCA TAGGTGCAGG ATTAATTACA CCTACCTTGA GAGCATTAAT ATCTAAAAAA TTAGACGGAG ATAACCAAGG ATCGATATTA AGTAATTTAC AAGGTCTTCA AAGTCTTGGA GGGGTATTAG GTATCGGTAT GGCTGGGAGA GTTTATGACG ATTTTGGTCC TAAAGCACCA TTTATTGCAG GATCAATTAT CTTAATTTTT ATGATTTACC TTATTGCTGA AGGGAGAGGT AACAAAATTT CTTATAATTA A
|
Protein sequence | MKKSLFKPSR KFTLFSAFIT LLNDRLSESI LLPILPSFVL LFDSKASTYG LLSCTYQLAQ FTASPFIGLM SDRYGRRPVT LFCITGSIIG ISILSFTVLF DWSNSIATIP LFLLFIARLI DGLSGGTAAT ATTILADISS PEKRAKTFGL IGVAFGLSFF LGNIFVVIFA KNTNNNFIIP VIIASIIPII NFILVLFYLP ETKPQNELNK SPQMLKNPLK KLFKVFKEDK IRKLSLAFFI YFIAFTGLTN ILIFFLQESL NWTTKASSGT LVVVGVIAII VQGGLIGPLV KRFGEMKLTL IGSGFILLAC ILLITTPKEN AAINIYSAVS FLAIGAGLIT PTLRALISKK LDGDNQGSIL SNLQGLQSLG GVLGIGMAGR VYDDFGPKAP FIAGSIILIF MIYLIAEGRG NKISYN
|
| |