| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_18581 |
|---|
| Symbol | gcvP |
|---|
| ID | 4720436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 1645556 |
|---|
| End bp | 1648465 |
|---|
| Gene Length | 2910 bp |
|---|
| Protein Length | 969 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640081558 |
|---|
| Product | glycine dehydrogenase |
|---|
| Protein accession | YP_001012172 |
|---|
| Protein GI | 123967091 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCT CAATTAACTC GGATTTATTT ATTGGAAGGC ATCTTGGATT GAAGGAGAAT
GATGAGAAAA AAATGCTTCA AAAACTTGGC TTTAATAACA TAGACGAATT TATTAATCAA
GTTATTCCTG AAGATATTCA GTTTAAAGAA AAATATTCAA ATAGCCTGCC AATAGGCTGT
TCTGAGATTG AGGCATTGAA CGAATTAGAA GAAATATCTA ATAAAAATCA TAAAATAAGA
TCCTTAATCG GTCTTGGATA TTATGGTACC CATACTCCAA AGGTTGTCCA AAGGCATGTA
TTAGAAAACC CCAGATGGTA TACAGCTTAT ACCCCTTATC AAGCAGAAAT TGCGCAAGGC
AGATTAGAAG CTTTATTTAA TTTTCAAACT TTAATTTGTG AATTGACAGC ATTCTCAGTG
GCTAATGCTT CGCTTTTAGA TGAGGGAACA GCTGCTGCAG AAGCAATGAC AATGAGTTTT
TCCGCCAGGA AAAATAAGTC CTCAAATATT TTTTTAGTAG ATGAAAATGT TTTTGATCAT
ACATTTAATG TTTTATTGAC GAGAGCTAAA CCATTAGGAA TTGATTTAAA ACGTTTTAAT
CAAAAGCACC TTAAAAATTA TGATGATGTT TTTGGTCTCT TAATTCAGCT TCCTGGGAAA
AATGGAGAAT TATTTGATCC AACATTTTTA GTTTCCCAAG CTCAAAAAGC AGAAATCATT
GTTACATCAA TTATTGATCC TCTTGCGCAA GTTTTAATAA AACCAATAGC CGAATTTGGA
GTAGATATAG CTGTTGGAAG TCTTCAAAGA TTTGGGGTCC CAATGGGCTT TGGTGGTCCT
CATGCAGCAT TTTTTGCATG TAGTGAAAAA TATAAAAGAC TTATACCCGG AAGAATAGTA
GGGCAAACTC TATCTAAAAA CGGAGAACAA TCACTGAGAT TGGCACTACA AACAAGAGAA
CAACATATAA GAAGAGAAAA AGCGACTAGT AATATTTGTA CAGCTCAATC GTTGCTAGCA
ATAATTTCCT CTTTTTATGC CATCTATCAT GGTGCTAATG GCTTAACAAA AATGGCTAAG
AGGTTAGTTT TATTAAGAAG ATATTTAGAA TCGTGTCTTT GTGAGTTAGG TTTCAAAATA
CCTCTTGGGA ATAGGTTTGA TAGTGTGGAT ATTTACTGCG AGGAATCTGA AAAGATTCAT
AAAGAAGCTT TGAAAAACGG ATTTAATTTT AGAATTTTAC CTTTGGGTTC GTCGATTGAG
GATTCTACAG GATTTGGAAT TTCCCTAGAT GAGCTTACTG ATGAAAATGA AATCCGTAAA
ATAGTTAGCT TAATAGCAAA TGGTGTCGGT AAAAAAGAAG ATTTTAAACA CATTAAAGTT
AATAATTCTT TTCATTTTGA AGGTATTCCT CTAAGAAATA AAGAATGGAT GCAACAAAAT
ATATTTGAGA ACTATCAAAG TGAGACTGAT TTAATGAGGT ATATTTTTAA ACTTGCTGAG
AAAGACTTTT CACTGGTTGA TGGAATGATT CCGCTGGGAA GTTGTACTAT GAAATTAAAT
TCTGCAGCAG AGCTTAGTCC AATTTCATGG GCTAATTTAT CTTCAATTCA TCCTTTCGCT
CCAGCTAATC AAACTAGAGG TTATTCAAAA ATAATAAGTG ATCTTGAGAA ATGGATTAGT
GAACTTATTG GTTTGAATTC AGTTTCGTTC CAACCAAATG CAGGCTCTCA AGGTGAGTTT
GCGGGTCTAT TGGCAATTAA TTCTTATTTC GCTTCAAAAG GCGATTTAGC AAGAAAAAAA
TGCTTAATTC CACAAAGTGC TCATGGAACA AATCCTGCTA GCGCTGTTAT GGCAGGTTTT
GATGTTGTAA CTATAAAATG TGATTCTGAG GGTAATATTT CATATGAGGA TTTATTAATT
AAGGTCAAAG AACTAGATAA TAAAATCGGT GCATTAATGC TAACTTATCC CTCTACTCAT
GGAGTTTTTG AATTAAAAAT CAAAGAAATT TGTGAATTAA TTCATTCAGT TGGCGCATTC
GTTTATTTGG ATGGGGCCAA TCTTAATGCT CAGGTCGGAT TGTGTAAGCC TGGAGATTAT
GGCGTGGATG TCTGCCATTT GAACTTACAT AAAACTTTTT GTATACCTCA TGGCGGCGGC
GGACCAGGTG TTGGTCCAGT TGCAACATCT GATATTTTAA GTCCTTTCCT TCCTTCCCAT
TCTTTAACAG ATAACATTTT TAGTCACCTT GGATATTCTG TATCTTCTTC ACAGCACGGA
AGTGCAAGTA TTCTTCCAAT AAGCTGGATG TATATTAAGA TGGCCGGTCA AAGCGGTTTA
AGGAAGGCGA GTACTCATGC AATATTGTCA GCAAATTATA TTGCTAATAA ATTAAAAAAT
AAATTTAGGA TTTTATATAA AGGACAAAAT AACTTCGTTG CTCATGAATG CATTCTTGAT
TTTCGGGATT TGAAGTCAAA AACAGGTTTA AGTGTAAATG ATATAGCCAA AAGATTAATA
GATTATAGTT TTCATGCTCC AACAATAAGT TGGCCGGTTC CTGAGACTAT TATGATTGAG
CCGACAGAAA GTGAAAGTTT GACAGAATTA AACAGATTTT GTGAAGCTAT GCTTTTAATA
AGCGAAGAAA TTGAAGAAAT TGAAAACAAT ATTGATCTTA AAAATAATAA TCTAATTAGT
AATGCTCCTC ATACCATAAG TGAATTGATC TCAGATAATT GGAATTATCC TTATTCAAAA
GAAAAGGCTG CATATCCTTA TAAAGGTAAA TACGAATATA AATTTTGGTC TTCAGTATCA
AGGATTGATA ATGCTTATGG AGATAGAAAT TTAATTTGTT CTTGTAATGT CAATGATCAA
GATTTCTTAG AGGAGAAAAA ATGTGCTTAA
|
|---|
| Protein sequence | MNPSINSDLF IGRHLGLKEN DEKKMLQKLG FNNIDEFINQ VIPEDIQFKE KYSNSLPIGC
SEIEALNELE EISNKNHKIR SLIGLGYYGT HTPKVVQRHV LENPRWYTAY TPYQAEIAQG
RLEALFNFQT LICELTAFSV ANASLLDEGT AAAEAMTMSF SARKNKSSNI FLVDENVFDH
TFNVLLTRAK PLGIDLKRFN QKHLKNYDDV FGLLIQLPGK NGELFDPTFL VSQAQKAEII
VTSIIDPLAQ VLIKPIAEFG VDIAVGSLQR FGVPMGFGGP HAAFFACSEK YKRLIPGRIV
GQTLSKNGEQ SLRLALQTRE QHIRREKATS NICTAQSLLA IISSFYAIYH GANGLTKMAK
RLVLLRRYLE SCLCELGFKI PLGNRFDSVD IYCEESEKIH KEALKNGFNF RILPLGSSIE
DSTGFGISLD ELTDENEIRK IVSLIANGVG KKEDFKHIKV NNSFHFEGIP LRNKEWMQQN
IFENYQSETD LMRYIFKLAE KDFSLVDGMI PLGSCTMKLN SAAELSPISW ANLSSIHPFA
PANQTRGYSK IISDLEKWIS ELIGLNSVSF QPNAGSQGEF AGLLAINSYF ASKGDLARKK
CLIPQSAHGT NPASAVMAGF DVVTIKCDSE GNISYEDLLI KVKELDNKIG ALMLTYPSTH
GVFELKIKEI CELIHSVGAF VYLDGANLNA QVGLCKPGDY GVDVCHLNLH KTFCIPHGGG
GPGVGPVATS DILSPFLPSH SLTDNIFSHL GYSVSSSQHG SASILPISWM YIKMAGQSGL
RKASTHAILS ANYIANKLKN KFRILYKGQN NFVAHECILD FRDLKSKTGL SVNDIAKRLI
DYSFHAPTIS WPVPETIMIE PTESESLTEL NRFCEAMLLI SEEIEEIENN IDLKNNNLIS
NAPHTISELI SDNWNYPYSK EKAAYPYKGK YEYKFWSSVS RIDNAYGDRN LICSCNVNDQ
DFLEEKKCA
|
|---|
| |