Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_18451 |
Symbol | tig |
ID | 4720423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1632255 |
End bp | 1633676 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640081545 |
Product | trigger factor |
Protein accession | YP_001012159 |
Protein GI | 123967078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.344876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAG AAGCATTAAT AGTAAAAACA ACCGCACTGC CTCAAAGTAG AATTGCTCTT GAATTAGAAA TCCCATCTAA TACATGCAAA TCATTCGTCA GTGAAACAAT AAATTCAATT AGTCGTTCAG CCAAAATCCC AGGATTTAGG CTTGGCAAAA TTCCAAAACA AGTATTAATA CAAAGAATTG GTATAAACCA ACTATATGCC TCTGCTCTAG AAAAAATAAT TGATAAATCT TGGAAAGAGG CCATAGAAAT GGAATCAATA GAGCCACTAA GTGAACCGGA ATTAGTTGAT GGATTTGAAT CATTACTTAA GAATTTCAAT CCGGAAAAAA CTTTAAAAAT TAATCTTCAA ACTGATGTTG CACCCACATT AAAATTAAAA AAATCAAAAG GCCTATCAGT TGAGATTATA AAAAGAAAAT TTGACCCCAA ATCCATAGAT GAAGCTTTAG AAAAATCAAG AAATCAACTA GCAAATATTA TTCCAGTTAT TAATAGACCC GCTAGATTAG GAGATATCGC TGTAGTGAGT TTCAAAGGCA TTTATAAAGA TTCCAAAAAA GCAATCGATG GAGGATCTAG TGACTCAATG GATCTTGAAT TAGAAAAGAA CAAAATGATT CCAGGGTTCG TTGAAGGTAT TGTTGGTATG AAAATCGATG ATAATAAAAC TCTTAATCTC AAATTTCCTG ATGACTACTC TCATGAAGAG TCCAGAGGGA AAGAAGCAAT CTTTGAAGTC AGTCTAAAAG ACCTTAAAGA GAAAGAATTG CCTGAACTAA ATGATGATTT TGCAAAACAG TCTGGAAATA AAGATTCATT AAAGGAACTT AAAAAAGATA TTGAAAAACA ATTAAAGGAA AATTTTGATA ACACTCAAAA AAATATCAAA ATTGAAGCTT TAATGGATGC ATTATCCAAA GAATTAGATG CTGAGATTCC AAAAGCAATG ATTGATATTG AAGTAAGAAA TAATATTGAA CAAACAGCGC AAAGATTTGC CCAACAAGGA ATGGATATCA AATCAACTTT TACCCCGGAA TTAGTTAAAA CTTTAGCAGA ATCAACTCGT CCTCAAGCTG AAAAAAATGT TCAAAGAAAT TTAGCTTTAA AAGCATTATC AGAAAGTGAG AATATTACAG TCGAGGATAA AGAAATAAAT CAAAAAATGA AGGAATATGA TGATGAAATT TCTAAATCAC AAAAACAAAT TGACATTCAG AAATTAAAAG AAGTAGTTCT TAACGATCTT CTAAAAGAAA AGTTAATAAC TTGGCTTGAA GAAAATTCAA CGGTTAAAGA AATAAGTGAA AAAGTAACAA AATCAACTAC AAAATCAAAG ACAAAATCAA AGACAAAGAA AGAAAGCCAA GCTAAAAGTG AACCGAATAA AAAGAAAAAA GAAAAAAAAT AA
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Protein sequence | MIKEALIVKT TALPQSRIAL ELEIPSNTCK SFVSETINSI SRSAKIPGFR LGKIPKQVLI QRIGINQLYA SALEKIIDKS WKEAIEMESI EPLSEPELVD GFESLLKNFN PEKTLKINLQ TDVAPTLKLK KSKGLSVEII KRKFDPKSID EALEKSRNQL ANIIPVINRP ARLGDIAVVS FKGIYKDSKK AIDGGSSDSM DLELEKNKMI PGFVEGIVGM KIDDNKTLNL KFPDDYSHEE SRGKEAIFEV SLKDLKEKEL PELNDDFAKQ SGNKDSLKEL KKDIEKQLKE NFDNTQKNIK IEALMDALSK ELDAEIPKAM IDIEVRNNIE QTAQRFAQQG MDIKSTFTPE LVKTLAESTR PQAEKNVQRN LALKALSESE NITVEDKEIN QKMKEYDDEI SKSQKQIDIQ KLKEVVLNDL LKEKLITWLE ENSTVKEISE KVTKSTTKSK TKSKTKKESQ AKSEPNKKKK EKK
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