Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_18431 |
Symbol | dapA |
ID | 4720421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1630190 |
End bp | 1631098 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640081543 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001012157 |
Protein GI | 123967076 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCCCA ACAATACACA ATTTTCTAAT CCAATATTTG GAAGAATATT AACTGCGATG GTTACTCCAT TTAAAGAAAA TGGGGGGGTT GATTATGAGT TAGCTATTAA ACTTGCTAAT CACCTTTGTG AAAATGGCTC TGATGGCATT GTGCTTTGTG GTACCACAGG AGAATCTCCA ACTCTTTCAT GGGATGAACA GCATAATTTA TTCGTTGCAG TAAAAAGTTC TTTAAATTCT AGATCGAAAG TTATTGTTGG TACAGGTAGT AATTGTACAA GTGAGGCTAT AGAAGCCACC AAAAAAGCTT ATGAATTTGG TGCTGATGGT GCTTTAGTGG TTGTTCCCTA TTATAATAAG CCTCCTCAAG AAGGTCTTTA TAACCACTTT AGTTCTATAG CTACTGCCGC AAGTGATTTA CCTTTAATGT TATATAACAT TCCCGGAAGA ACTGGTTGTA ATTTATTACC TACGACTGTA AACAAACTTA TGAATTTTCC CAATATTCTC AGTATTAAAG CAGCAAGCGG TAGAATAGAA GAAGTGACTG AGTTAAGGGC AGCGTGCGGC CCTAAACTTT TTATATATAG TGGCGATGAT TCATTATTGC TTCCTATGCT ATCAGTAGGT GCTGTTGGTG TAGTAAGCGT TGCTAGCCAC ATTGTTGGGT TGCAGCTAAA AATGATGATT GAATCGTTTC AAAAAGGAGA ATTCTCTATT GCCCTTGATA TTCATGAAAA GCTGCAACCA CTTTTTAAAG CACTATTTGA AACGACAAAT CCAATTCCCA TCAAAGCTGC TTTAGAACTA ACAGGTTGGC AAGTAGGTTC TCCTAGGAAT CCATTAACAC CTCTTATTAA AGAAAAGAAA GACAATTTAT TTCAGATAAT TCAAAATCTG TCTTTGTAA
|
Protein sequence | MIPNNTQFSN PIFGRILTAM VTPFKENGGV DYELAIKLAN HLCENGSDGI VLCGTTGESP TLSWDEQHNL FVAVKSSLNS RSKVIVGTGS NCTSEAIEAT KKAYEFGADG ALVVVPYYNK PPQEGLYNHF SSIATAASDL PLMLYNIPGR TGCNLLPTTV NKLMNFPNIL SIKAASGRIE EVTELRAACG PKLFIYSGDD SLLLPMLSVG AVGVVSVASH IVGLQLKMMI ESFQKGEFSI ALDIHEKLQP LFKALFETTN PIPIKAALEL TGWQVGSPRN PLTPLIKEKK DNLFQIIQNL SL
|
| |