Gene P9515_18371 details

Gene Information

• Locus tag: P9515_18371
• Symbol: holA
• ID: 4720415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 1621363
• End bp: 1622364
• Gene Length: 1002 bp
• Protein Length: 333 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 640081537
• Product: DNA polymerase III subunit delta
• Protein accession: YP_001012151
• Protein GI: 123967070
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAC AAATAATTTG GGGAAACGAT TTAAATGCAT GTAATAAGTT TATTAAAAAA 
ATAATTGATC AAAAGGTATC CAAAATTTGG ATAGAAATAA ACGTTAGCTA TTTAAATGGT 
GATGACGATA ACCAAATAAA ACAAGCATTT GATGAAATAC TAACACCTCC TTTAGGCGAT 
GGATCAAGAG TAGTTGTATT AAAAAATAAC CCAATATTTA CTAACAAAAA TGAGGATATA 
AGGATCAAAT TCGAAAAAAT TTATCAAAAT ATTCCAGATA ATACTTACTT TATTTTGCAA 
AACATCAAAA AACCAGACTC AAGACTAAAA AGTACCAAAT TCATTCAAAA TTTAATTAAA 
AAAGATTTAG TACTTGAAAC TTCATTTTCA TTACCAGATA TCTGGGATTA TGAAGGCCAG 
AAAAGATACT TAGAAGTCAC AGCAAATTCA ATGAATATTC AACTAGGGGA AGGAGCTGCT 
GAATTAATTA TGAAATCAAT AGGAAATGAT AGTTTTAACT TAAGGAACGA ATTAGCTAAA 
GCGAAGATAT ATTTATCTGC ATCCAATAGG AACGAAACTA AAGAGCTTAT TCTGAAAGTT 
GATGAAATTA AAAATATATT TAATGATCAT CAATCAAATA TTTTTAAAAT AATTGATCAT 
CTTTTACAAA ATAATATTAA CGAAAGTCTT ATCGATATTC ATTATTTATT AAAAAAAGGC 
GAGCCTGCTT TAAGGCTTAA TGCAGGATTA ATAAGTCAAA TCAGAATTCA TACCATAGTA 
AAGTTACTTC ATAAATCAGG TGAGCAAGAT TTACCAACAA TATGTAAGAT TGCTAATATA 
TCAAATCCAA AAAGAATCTT TTTTATCCGT AAGAAAGTAA ATAATACATC CTCAAATTTC 
TTAATTAAAT TGATGAGTAA TTTATTAGAT ATTGAATTCT CACTAAAAAA AGGTAATAAT 
CCCTTTAATG TTTTTACAGA ACATCTCGTT AACTTAAGTT AA 

 

Protein sequence

MPIQIIWGND LNACNKFIKK IIDQKVSKIW IEINVSYLNG DDDNQIKQAF DEILTPPLGD 
GSRVVVLKNN PIFTNKNEDI RIKFEKIYQN IPDNTYFILQ NIKKPDSRLK STKFIQNLIK 
KDLVLETSFS LPDIWDYEGQ KRYLEVTANS MNIQLGEGAA ELIMKSIGND SFNLRNELAK 
AKIYLSASNR NETKELILKV DEIKNIFNDH QSNIFKIIDH LLQNNINESL IDIHYLLKKG 
EPALRLNAGL ISQIRIHTIV KLLHKSGEQD LPTICKIANI SNPKRIFFIR KKVNNTSSNF 
LIKLMSNLLD IEFSLKKGNN PFNVFTEHLV NLS