Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_18101 |
Symbol | mreC |
ID | 4719979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1594626 |
End bp | 1595375 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640081509 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001012124 |
Protein GI | 123967043 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.448096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATA TTCGAAGAAT ATCAACTAAT CGTTGGTGGC ATAAAAAGAA GAATTGGGTT TTATTTATAT TTTTATTGTT TTTGATTTTT GTGAGAATAT CCAGAGGATC TCTATATAAA GACCTTTATT TTTTAATTTC AAAACCGTTT TGGCCAGGCC AATTTCAAAG AGAGGTTTTA ACTAAAAGTG TTGAACAAGA GTCTTTTGTA AGGTTAAAAC AGCTAGAGAA AGATAATAAA AGATTACGTG AAATTTTATC ACTACAAAGA TTATCTGACT CTGAAACTAT TTCAGCAACT GTTATTTCAA GAAAAACAGG GAGCTGGTGG AGGCAAATTA TTTTAAATAA AGGTTCCAAA GACGGAGTAG AAGTTGGGAG TTTTGTTGTT GGCCCTGGAG GATTATTAGG AAGAGTGAAT AATACTTCTT TATTTACTTC GTCTGTCACA TTATTAACTT CTCCTGAGAG TAAAGTGGGG ATTTGGGTTG AAAGAATTCA GAGCCATGGG TTACTAGTGG GCTTAGGAAA TGATCATCCA AAAGTAATTT TTTATAATAA GGAGGTTGAT ATTGAAGTGG GCGATTTTGT TTTATCATCC CCCGCCAGCA CTTTATTGCC TCCAAATATT CCTATAGGTA TTATTCAATC TGTTGATGCG GAATTCAAAG CACAAAAAAC TGCAAATCTT TTGCTTTTAG GAAAACCTCA AGCAATAGAT TGGGTTCAAA TCGTAAAAGT TAAAATTTAA
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Protein sequence | MVDIRRISTN RWWHKKKNWV LFIFLLFLIF VRISRGSLYK DLYFLISKPF WPGQFQREVL TKSVEQESFV RLKQLEKDNK RLREILSLQR LSDSETISAT VISRKTGSWW RQIILNKGSK DGVEVGSFVV GPGGLLGRVN NTSLFTSSVT LLTSPESKVG IWVERIQSHG LLVGLGNDHP KVIFYNKEVD IEVGDFVLSS PASTLLPPNI PIGIIQSVDA EFKAQKTANL LLLGKPQAID WVQIVKVKI
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