Gene P9515_18051 details

Gene Information

• Locus tag: P9515_18051
• Symbol: smpB
• ID: 4719974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 1590773
• End bp: 1591270
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640081504
• Product: SsrA-binding protein
• Protein accession: YP_001012119
• Protein GI: 123967038
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0878615
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCAA AAGTTTCAAA CAAATCAAAT AAAAGCAACA AAAAAGAAGC CGTTTTTAAA 
CGTCTTGCAG AAAATCGATA TGCAAAATTT CAGTATGAAA TCAGTGAAAC AATCGAAGCT 
GGAATTGAAC TTTTAGGGAC TGAAGTGAAA TCTATAAGAA ACGGGAATGT AAATTTAAGA 
GATGGGTATT GTTCATTTAG AGATGGTGAA ATACTTTTAT TAAATGTCCA CATTTCCCCA 
CATAAAAATG TTGGCTCTTT TTTTAATCAC GATCCACTAC GAAATAGAAA ATTATTGTTA 
CATAAAAAAG AAATCTTTAA GCTTAAATCC AATACTGAGA AAAAGGGGTT AACCATTATT 
CCCTTATCTA TTTATTTAAA AGGGTCATGG ATAAAATTAA CAATTGGTAT AGGTAAAGGT 
AAAAAATTAC ATGATAAAAG ACAAGCCGAT AAACAAAAAG ATATTAAAAG AGAAATAAAA 
ACTGCTCTTA AGAGATAA 

 

Protein sequence

MIAKVSNKSN KSNKKEAVFK RLAENRYAKF QYEISETIEA GIELLGTEVK SIRNGNVNLR 
DGYCSFRDGE ILLLNVHISP HKNVGSFFNH DPLRNRKLLL HKKEIFKLKS NTEKKGLTII 
PLSIYLKGSW IKLTIGIGKG KKLHDKRQAD KQKDIKREIK TALKR