Gene P9515_17591 details

Gene Information

• Locus tag: P9515_17591
• Symbol: speD
• ID: 4719881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 1544821
• End bp: 1545255
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640081454
• Product: S-adenosylmethionine decarboxylase proenzyme
• Protein accession: YP_001012073
• Protein GI: 123966992
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.52127
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTC CCAAAAAAAA TAAAACTTTT AAAGCATTTA ATGATGAGAA GAAATTAATC 
TATAAAAGTA AGCATTTTTT GTTAGAACTT TATAGATGTG ATTATGAAAA ATTGAATGAT 
GAATCTTTTC TGCGTTGTAC ATTAAATAAT GCTGCCAAAC TAGCTAATGC AACAATCTTA 
AATCTAATAA GTAATAAATT TGAACCTCAG GGAGTTACAG CAATTGCTTT ACTAGCTGAA 
TCTCATCTTT CAATACATAC ATGGCCTGAA GCGCATTATT CTGCAGTTGA TATTTTTACA 
TGTGGCCAAA ATATGAAGCC CGATATTTCT TGTCAATACT TAATTCAAGC TTTAATGGCT 
GAAGAGCATC TCCTACGTGT AATTAATAGG AATCCTCCTT TGGAAATACA TAATCAAGTA 
AGAAAAATAA TTTAA 

 

Protein sequence

MDVPKKNKTF KAFNDEKKLI YKSKHFLLEL YRCDYEKLND ESFLRCTLNN AAKLANATIL 
NLISNKFEPQ GVTAIALLAE SHLSIHTWPE AHYSAVDIFT CGQNMKPDIS CQYLIQALMA 
EEHLLRVINR NPPLEIHNQV RKII