| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_17561 |
|---|
| Symbol | thiF |
|---|
| ID | 4719878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 1541555 |
|---|
| End bp | 1542703 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640081451 |
|---|
| Product | molybdopterin biosynthesis protein |
|---|
| Protein accession | YP_001012070 |
|---|
| Protein GI | 123966989 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT CAATTGATCA CAAATCTGAT TCCTTAACTT TAGATGAAGA AGATAGATAC
AAGAGACATT TAACACTCAA TGAAATAGGA TTAAAGGGAC AATTAAAACT TAAACGCAGT
TCAGTAGTTT GTATTGGCGC AGGAGGTTTA GGCTCTTCTG TATTAATTTA TCTTGCCGCT
GCAGGAATTG GAACAATAGG AATAGTTGAT AATGATCAAG TTGAGAAGTC GAATCTACAA
AGACAAATAA TTCATGAAAC AAATACAGTT GGGGATTTAA AAATTGATTC TGCTCAAGAA
AGAATTAGAA GATTGAATCC TAATATTGAA GTAATAACTT TTGCTGAACG AATTAACTCA
AATAATATTC TCGATATTAT TAATCAATTT GATATTGTTT GTGATTGTTC AGATAACTTT
GGTACTCGTT ATTTAATAAA CGATGCTTGC TTAATACTTG ATAAACCTTT AGTTTTTGGA
AGCGTTCAAG GATTTGAAGG CCAAATCAGT GTTTTTAATC TAAAAAAAAA TAGTCCCAAT
TTAAGAGACT TACTCCCGGA ATCGCCTTTA AAAAATAATA TTCCTAGCTG CGAAGAATTT
GGCGTTATAG GAGTTTCAAC TGGTCTTATA GGAGTTTTAC AAGCAAATGA AGCAATAAAG
ATTATTCTTA AAAAAGGGCA AATTCTTGAT GGGAAGATTT TGATTTTCAA CCTTCTCAAT
ATGAATATAA AAACATTGAC TTTAAAAGCT GATAAATTTA CAAATACGAT TAATGACCTT
TCTGAGTTTG AAGATTTTTA TAAAGACATT GAATGTCAAG ATAATATAAA AATTAATAAA
ATAGATTCCA CGACATTTGA AACACTATAC AGATCAAATT ATAATAATCT ACTAATAATA
GATGTTAGAG AAAAAGAGGA ATTTAATAAA TACTCTATTA AAGGAGCGAT ATCTATACCA
CTTAATAATC TAGACCAAAA ACCACACCTA GAATTTATCA AACAAGAAAG TTTGGATAAA
GAAGTATTTA CATTATGTCA AGCAGGAAAA CGATCTGAAA AAGCTTCAAA GATTTTGATG
AAATTTAAAA TCTCATCAAA ATCAATTGAA GGAGGAATTG CAAATATTAA ACAACTAATT
TTTCATTAA
|
|---|
| Protein sequence | MKISIDHKSD SLTLDEEDRY KRHLTLNEIG LKGQLKLKRS SVVCIGAGGL GSSVLIYLAA
AGIGTIGIVD NDQVEKSNLQ RQIIHETNTV GDLKIDSAQE RIRRLNPNIE VITFAERINS
NNILDIINQF DIVCDCSDNF GTRYLINDAC LILDKPLVFG SVQGFEGQIS VFNLKKNSPN
LRDLLPESPL KNNIPSCEEF GVIGVSTGLI GVLQANEAIK IILKKGQILD GKILIFNLLN
MNIKTLTLKA DKFTNTINDL SEFEDFYKDI ECQDNIKINK IDSTTFETLY RSNYNNLLII
DVREKEEFNK YSIKGAISIP LNNLDQKPHL EFIKQESLDK EVFTLCQAGK RSEKASKILM
KFKISSKSIE GGIANIKQLI FH
|
|---|
| |