Gene P9515_17401 details

Gene Information

• Locus tag: P9515_17401
• Symbol: rplC
• ID: 4719822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 1528503
• End bp: 1529156
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640081434
• Product: 50S ribosomal protein L3
• Protein accession: YP_001012054
• Protein GI: 123966973
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATAG GAATCTTAGG AAAAAAATTG GGAATGTCCC AATTATTCGA TGATGATGGA 
AATGCAGTAC CAGTTACTCT TATAGAGGCT GGTCCATGTC GTGTCACCCA ATTAAAAACT 
CAATCTTTGG ATGGTTATAC TGCTATTCAA ATAGGTTATG GCGTATCGAA AGATAAGCAC 
TTAAGTAAAC CTGAGAAAGG TCATTTATTA AAGTCAGGCA AAGAACTTTT AAAACACTTA 
AAAGAATTTA AAGTTGAAGA AAATTCTTCT TACGAGATTG GAAAAGAAAT AACTGTTACA 
AATTTTGAGG TCGGTCAAAA AGTTGATATA AGCGGAAAAT CAATGGGAAG AGGTTTTTCT 
GGATATCAGA AAAGACATGG TTTCAGTAGA GGACCTATGA GCCATGGTTC AAAAAACCAT 
AGAGCTCCAG GTTCTACAGG GGCTGGAACA ACACCGGGGC GAATTTATCC TGGGAAAAGA 
ATGGCAGGAA GATATGGAGG AAAAAAAATT ACTACAAAAG GTTTACTGGT GGTTAAAATT 
GATGATCAGA AAAATTTGCT TGTAGTTAAA GGATCTGTAC CAGGAAAACC TGGTTCGATA 
GTGAATATTA GGCCTAACAA TACTGTAGGT AATAAAGGAG GAACTAAATC ATGA 

 

Protein sequence

MSIGILGKKL GMSQLFDDDG NAVPVTLIEA GPCRVTQLKT QSLDGYTAIQ IGYGVSKDKH 
LSKPEKGHLL KSGKELLKHL KEFKVEENSS YEIGKEITVT NFEVGQKVDI SGKSMGRGFS 
GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKKI TTKGLLVVKI 
DDQKNLLVVK GSVPGKPGSI VNIRPNNTVG NKGGTKS