Gene P9515_17391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_17391 
SymbolrplD 
ID4719821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp1527874 
End bp1528506 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content36% 
IMG OID640081433 
Product50S ribosomal protein L4 
Protein accessionYP_001012053 
Protein GI123966972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTT TAGAAACTTT AAAATGGGAT GGTAAAAAAG TGGGCAAAGT TTCAATTGAT 
TTGAAAGTTG CTAAAGAGAC TTCTTCCTCC GATTTAATTC ATAGAGCTGT TCTTAGACAA 
TTAGCTAACC AAAGACAAGG TACTGCATCT ACCTTGACAA GGTCCGAAGT TCGCGGAGGC 
GGTAGAAAGC CATATAAGCA AAAGGGGACA GGAAGAGCCC GTCAAGGATC AATAAGAACT 
CCATTAAGAC CCGGCGGAGG GGTGATTTTT GGCCCTAAAC CGCGTTCGTA TAATCTGGAT 
ATGAATCGAA AGGAAAGAAG ATTAGCCCTT AGAACAGCTT TAATGTCCAG AGTTGATGAT 
ATAAAAGCCG TAGAAGATTT TGGCTCTACA CTTAATCAAC CAAAAACTAG TGAGATAATA 
AATGGTCTTT CTAGATTAGG AATAGAAAAA ACAGAAAAAG TTTTGGTTAT TCTTGATAGT 
CCTTCTGAAG TCATAAAAAA ATCTATCAAC AATATTGCAA AAGTAAAATT AATTGCTGCT 
GATCAGTTAA ATGTTTTTGA TATTCTCAAT GCTAATAAGC TAGTGATAGG TCAATCAGCA 
ATCAATAAAA TTCAGGAGGT TTATGCATCA TGA
 
Protein sequence
MTTLETLKWD GKKVGKVSID LKVAKETSSS DLIHRAVLRQ LANQRQGTAS TLTRSEVRGG 
GRKPYKQKGT GRARQGSIRT PLRPGGGVIF GPKPRSYNLD MNRKERRLAL RTALMSRVDD 
IKAVEDFGST LNQPKTSEII NGLSRLGIEK TEKVLVILDS PSEVIKKSIN NIAKVKLIAA 
DQLNVFDILN ANKLVIGQSA INKIQEVYAS