Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_17261 |
Symbol | rplF |
ID | 4719808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1521985 |
End bp | 1522524 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640081420 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001012040 |
Protein GI | 123966959 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAA TAGGAAAATC CCCAGTACAA ATCCCTGACA AGGTATCAGT TGATATTAAT GGCTTAACTA TTACCGTAAA GGGTCCAAAA GGTGAACTTA AAAGACTCAT GCCTGAAGGT GTAGATTTTG TCCAAAAAGA AAACCAGATT GTTGTTACTC CATCTACGAC AAAAAGATAT TCAAGAGAAA GGCATGGCCT CTGTAGGACA TTGATTTCAA ATATGGTACA GGGAGTAACT GATGGATATT CAAAGAAATT AGAAATAGTA GGTGTTGGAT CTAGAGCTCA AGTTAAAGGA AAAACTTTAG TAGTAAGTGC TGGATATAGC CATCCAGTAG AAATGACCCC CCCCGATGGT ATAACATACA AAGTTGAAAG TAATACGAAT GTAACTGTAT CTGGGATTGA CAAAGAAATT GTTGGAAACG AAGCCGCAAA AATCAGATCA ATCAGACCTC CCGAACCTTA TAAAGGTAAA GGTATTAAAT ACCAAGATGA GAGAATCATC AGAAAAGCTG GTAAATCCGG CAAAAAATAA
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Protein sequence | MSRIGKSPVQ IPDKVSVDIN GLTITVKGPK GELKRLMPEG VDFVQKENQI VVTPSTTKRY SRERHGLCRT LISNMVQGVT DGYSKKLEIV GVGSRAQVKG KTLVVSAGYS HPVEMTPPDG ITYKVESNTN VTVSGIDKEI VGNEAAKIRS IRPPEPYKGK GIKYQDERII RKAGKSGKK
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