Gene P9515_17261 details

Gene Information

• Locus tag: P9515_17261
• Symbol: rplF
• ID: 4719808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 1521985
• End bp: 1522524
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640081420
• Product: 50S ribosomal protein L6
• Protein accession: YP_001012040
• Protein GI: 123966959
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGAAAATC CCCAGTACAA ATCCCTGACA AGGTATCAGT TGATATTAAT 
GGCTTAACTA TTACCGTAAA GGGTCCAAAA GGTGAACTTA AAAGACTCAT GCCTGAAGGT 
GTAGATTTTG TCCAAAAAGA AAACCAGATT GTTGTTACTC CATCTACGAC AAAAAGATAT 
TCAAGAGAAA GGCATGGCCT CTGTAGGACA TTGATTTCAA ATATGGTACA GGGAGTAACT 
GATGGATATT CAAAGAAATT AGAAATAGTA GGTGTTGGAT CTAGAGCTCA AGTTAAAGGA 
AAAACTTTAG TAGTAAGTGC TGGATATAGC CATCCAGTAG AAATGACCCC CCCCGATGGT 
ATAACATACA AAGTTGAAAG TAATACGAAT GTAACTGTAT CTGGGATTGA CAAAGAAATT 
GTTGGAAACG AAGCCGCAAA AATCAGATCA ATCAGACCTC CCGAACCTTA TAAAGGTAAA 
GGTATTAAAT ACCAAGATGA GAGAATCATC AGAAAAGCTG GTAAATCCGG CAAAAAATAA 

 

Protein sequence

MSRIGKSPVQ IPDKVSVDIN GLTITVKGPK GELKRLMPEG VDFVQKENQI VVTPSTTKRY 
SRERHGLCRT LISNMVQGVT DGYSKKLEIV GVGSRAQVKG KTLVVSAGYS HPVEMTPPDG 
ITYKVESNTN VTVSGIDKEI VGNEAAKIRS IRPPEPYKGK GIKYQDERII RKAGKSGKK