| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_17171 |
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| Symbol | rpoA |
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| ID | 4719799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 1516606 |
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| End bp | 1517544 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640081411 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001012031 |
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| Protein GI | 123966950 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.84912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCAAT ACCAGATTGA CAGAATCGAT CATCAAACAG CAAATGATCG CTCCCAAACA
GGAACATTTC TTATTGGCCC CTTAGAGAGA GGGCAAGCTA CTACCCTCGG GAACTCTTTA
AGAAGAGTGC TTATGGGAGG ACTTGAAGGA AGTGCTGTTA CTGCGGTAAG GATTGCAGGA
ATCAATCATG AATACGCCAC TATCCCAGGG GTTAGAGAAG ACGTTCTAGA TATTCTTTTA
AATTGTAAGC AACTTTCTAT TAATAGTTCG AACCCAGAGC TTGAAATTGG GAGATTAGTT
GTTAGCGGTC CCATGGAAGT AAAGGCAAAC GATATACAAT TTTCTTCACA GGTTGAAATT
GTTGATGGAG ATAAGCCTAT TGCGACTATT CAAGAGGGAC ATAATCTAGA GCTTGAAATT
CATGTGGAAA GAGGTGTAGG TTATAGACCT GTAGATCGCA GAAACCAAGA AACTACATCT
GTTGACTTGC TTCAAATTGA TGCTGTATTT ATGCCTGTTA AGAGAGTAAA TTTCTCTATA
GATGAAACTG CGGTAGCAGA GGGTGGAACA GGTAGAGAGA GATTAACAAT GGAAGTTGTA
ACAGATGGAT CAACTAGCCC CGATGATGCA ATTGCAGAAG CTGCAAATCA GTTAATTGAA
CTTTTTCAGC CACTTGCGAC TGTTACAATG GTTGAAGAAA TACCTGAAGA GCCAGAACCA
TCTCCAGAAG CTCAAATTCC ATTAGAAGAA TTAAACTTGT CTGTTAGAGC GTATAATTGT
CTAAAAAGAG CTCAAGTTAA TTCTGTTTCA GATTTAATGG GATTTAGTTA TGAAGATCTT
TTAGAAATTA AGAACTTTGG CTCCAAATCT GCAGATGAGG TTATTGAAGC TCTTGAGCGC
ATAGGTATTT CAATTCCACA AAGCAGGACA TCTGTTTAA
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| Protein sequence | MLQYQIDRID HQTANDRSQT GTFLIGPLER GQATTLGNSL RRVLMGGLEG SAVTAVRIAG
INHEYATIPG VREDVLDILL NCKQLSINSS NPELEIGRLV VSGPMEVKAN DIQFSSQVEI
VDGDKPIATI QEGHNLELEI HVERGVGYRP VDRRNQETTS VDLLQIDAVF MPVKRVNFSI
DETAVAEGGT GRERLTMEVV TDGSTSPDDA IAEAANQLIE LFQPLATVTM VEEIPEEPEP
SPEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SV
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